| RVdb StrainID | CNP03632 | GenBank Accession | KP890664.1 |
| Species | RVC | Sequence Length | 7127 nt |
| Serotype | 26 Checked by RVdb | Serotype (GenBank) | 26 |
| Definition | Rhinovirus C isolate 8097-MY-11, complete genome | GenBank Submission Date | 2022-11-03 |
| Strain Name | 8097-MY-11 | Sampling Date | 2011-05-09 |
| Sampling Country | Malaysia | Sampling location | University Malaya Medical Center (UMMC) |
| Isolation Source | nasopharyngeal swab | NCBI Taxon ID | 463676 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC011763 | 1A (VP4) | 641 | 841 | 0 | 0 | 201 | |
| SQC011764 | 1B (VP2) | 842 | 1627 | 0 | 0 | 786 | |
| SQC011765 | 1C (VP3) | 1628 | 2335 | 0 | 0 | 708 | |
| SQC011766 | 1D (VP1) | 2336 | 3157 | 0 | 0 | 822 | |
| SQC011767 | 2A (P2-A) | 3158 | 3583 | 0 | 0 | 426 | |
| SQC011768 | 2B (P2-B) | 3584 | 3880 | 0 | 0 | 297 | |
| SQC011769 | 2C (P2-C) | 3881 | 4855 | 0 | 0 | 975 | |
| SQC011770 | 3'UTR | 7079 | 7127 | 0 | 0 | 49 | |
| SQC011771 | 3A (P3-A) | 4856 | 5080 | 0 | 0 | 225 | |
| SQC011772 | 3B (VPg) | 5081 | 5146 | 0 | 0 | 66 | |
| SQC011773 | 3D | 5696 | 7075 | 0 | 0 | 1380 | |
| SQC011774 | 5'UTR | 1 | 640 | 0 | 0 | 640 | |
| SQC011775 | CDS | 641 | 7078 | 0 | 0 | 6438 | |
| SQC011776 | protease 3C | 5147 | 5695 | 0 | 0 | 549 | |
| SQC011777 | VP4/2 | 641 | 1071 | 0 | 0 | 431 | |
| SQC011778 | genome | 1 | 7127 | 0 | 0 | 7127 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC005982 | CDS | 1 | 2145 | 0 | 0 | 2145 | |
| SPC005983 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC005984 | 3D | 1686 | 2145 | 0 | 0 | 460 | |
| SPC005985 | 2C (P2-C) | 1081 | 1405 | 0 | 0 | 325 | |
| SPC005986 | 1D (VP1) | 566 | 839 | 0 | 0 | 274 | |
| SPC005987 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC005988 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPC005989 | protease 3C | 1503 | 1685 | 0 | 0 | 183 | |
| SPC005990 | 2A (P2-A) | 840 | 981 | 0 | 0 | 142 | |
| SPC005991 | 2B (P2-B) | 982 | 1080 | 0 | 0 | 99 | |
| SPC005992 | 3A (P3-A) | 1406 | 1480 | 0 | 0 | 75 | |
| SPC005993 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC005994 | 3B (VPg) | 1481 | 1502 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 27199901 | Comparative Genetic Analyses of Human Rhinovirus C (HRV-C) Complete Genome from Malaysia. | 2016 | Front Microbiol | View More |