| RVdb StrainID | CNP03582 | GenBank Accession | KR997883.1 |
| Species | RVC | Sequence Length | 2020 nt |
| Serotype | -N/A- | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C isolate HRV-C_Pat21_ID813T_5UTR/VP3 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-C_Pat21_ID813T_5UTR/VP3 | Sampling Date | 2008-10-07 |
| Sampling Country | Tanzania | Sampling location | 1 urban and 1 rural hospital in Tanzania |
| Isolation Source | nasopharynx | NCBI Taxon ID | 463676 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC011732 | 1A (VP4) | 378 | 578 | 0 | 0 | 201 | |
| SQC011733 | 1B (VP2) | 579 | 1372 | 0 | 0 | 794 | |
| SQC011734 | 1C (VP3) | 1373 | 0 | 0 | 1 | 648 | |
| SQC011735 | 5'UTR | 1 | 377 | 0 | 0 | 377 | |
| SQC011736 | CDS | 378 | 0 | 0 | 1 | 1643 | |
| SQC011737 | VP4/2 | 378 | 808 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC005206 | CDS | 1 | 547 | 0 | 1 | 547 | |
| SPC005207 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC005208 | 1B (VP2) | 68 | 332 | 0 | 0 | 265 | |
| SPC005209 | 1C (VP3) | 333 | 547 | 0 | 1 | 215 | |
| SPC005210 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 26670243 | Molecular Epidemiology of Human Rhinoviruses and Enteroviruses Highlights Their Diversity in Sub-Saharan Africa. | 2015 | Viruses | View More |