RVdb StrainID | CNP03032 | GenBank Accession | LC004784.1 |
Species | RVC | Sequence Length | 2322 nt |
Serotype | 30 Added by RVdb | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus C gene for polyprotein, VP2, VP3, VP1 region, partial cds, strain: HRV-C/JPN/Kumamoto18/2011 | GenBank Submission Date | 2022-11-03 |
Strain Name | HRV-C/JPN/Kumamoto18/2011 | Sampling Date | 2011 |
Sampling Country | Japan | Sampling location | Kanagawa, Yokohama |
Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC011365 | 1B (VP2) | 0 | 795 | 1 | 0 | 795 | |
SQC011366 | 1C (VP3) | 796 | 1500 | 0 | 0 | 705 | |
SQC011367 | 1D (VP1) | 1501 | 0 | 0 | 1 | 822 | |
SQC011368 | CDS | 0 | 0 | 1 | 1 | 2322 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC010062 | CDS | 1 | 774 | 0 | 1 | 774 | |
SPC010063 | 1D (VP1) | 501 | 774 | 0 | 1 | 274 | |
SPC010064 | 1B (VP2) | 1 | 265 | 1 | 0 | 265 | |
SPC010065 | 1C (VP3) | 266 | 500 | 0 | 0 | 235 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
25640899 | Molecular evolution of the VP1, VP2, and VP3 genes in human rhinovirus species C. | 2015 | Sci Rep | View More |