| RVdb StrainID | CNP02867 | GenBank Accession | LC428175.1 |
| Species | RVC | Sequence Length | 6935 nt |
| Serotype | 9 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C C9-NIID JPN-2015 gene for polyprotein, partial cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | C9-NIID JPN-2015 | Sampling Date | 2015-09-24 |
| Sampling Country | Japan | Sampling location | Tokyo |
| Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC011242 | 1A (VP4) | 598 | 798 | 0 | 0 | 201 | |
| SQC011243 | 1B (VP2) | 799 | 1584 | 0 | 0 | 786 | |
| SQC011244 | 1C (VP3) | 1585 | 2289 | 0 | 0 | 705 | |
| SQC011245 | 1D (VP1) | 2290 | 3105 | 0 | 0 | 816 | |
| SQC011246 | 2A (P2-A) | 3106 | 3531 | 0 | 0 | 426 | |
| SQC011247 | 2B (P2-B) | 3532 | 3828 | 0 | 0 | 297 | |
| SQC011248 | 2C (P2-C) | 3829 | 4806 | 0 | 0 | 978 | |
| SQC011249 | 3A (P3-A) | 4807 | 5031 | 0 | 0 | 225 | |
| SQC011250 | 3B (VPg) | 5032 | 5097 | 0 | 0 | 66 | |
| SQC011251 | 3D | 5647 | 0 | 0 | 1 | 1289 | |
| SQC011252 | 5'UTR | 0 | 597 | 1 | 0 | 597 | |
| SQC011253 | CDS | 598 | 0 | 0 | 1 | 6338 | |
| SQC011254 | protease 3C | 5098 | 5646 | 0 | 0 | 549 | |
| SQC011255 | VP4/2 | 598 | 1032 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC010595 | CDS | 1 | 2113 | 0 | 0 | 2113 | |
| SPC010596 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC010597 | 3D | 1684 | 2113 | 0 | 1 | 430 | |
| SPC010598 | 2C (P2-C) | 1078 | 1403 | 0 | 0 | 326 | |
| SPC010599 | 1D (VP1) | 565 | 836 | 0 | 0 | 272 | |
| SPC010600 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC010601 | 1C (VP3) | 330 | 564 | 0 | 0 | 235 | |
| SPC010602 | protease 3C | 1501 | 1683 | 0 | 0 | 183 | |
| SPC010603 | 2A (P2-A) | 837 | 978 | 0 | 0 | 142 | |
| SPC010604 | 2B (P2-B) | 979 | 1077 | 0 | 0 | 99 | |
| SPC010605 | 3A (P3-A) | 1404 | 1478 | 0 | 0 | 75 | |
| SPC010606 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC010607 | 3B (VPg) | 1479 | 1500 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 30836639 | Propagation of Rhinovirus C in Differentiated Immortalized Human Airway HBEC3-KT Epithelial Cells. | 2019 | Viruses | View More |