| RVdb StrainID | CNP01852 | GenBank Accession | MH828520.1 |
| Species | RVC | Sequence Length | 6420 nt |
| Serotype | 36 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C strain vzhrvc4 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | vzhrvc4 | Sampling Date | 2014-06-30 |
| Sampling Country | Viet Nam | Sampling location | Viet Nam |
| Isolation Source | NT swab | NCBI Taxon ID | 463676 |
| Sequencing Technology | Illumina | Assembly Method | CLC Assembly v. 5.0.4 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC010728 | 1A (VP4) | 1 | 201 | 0 | 0 | 201 | |
| SQC010729 | 1B (VP2) | 202 | 986 | 0 | 0 | 785 | |
| SQC010730 | 1C (VP3) | 987 | 1695 | 0 | 0 | 709 | |
| SQC010731 | 1D (VP1) | 1696 | 2511 | 0 | 0 | 816 | |
| SQC010732 | 2A (P2-A) | 2512 | 2937 | 0 | 0 | 426 | |
| SQC010733 | 2B (P2-B) | 2938 | 3234 | 0 | 0 | 297 | |
| SQC010734 | 2C (P2-C) | 3235 | 4212 | 0 | 0 | 978 | |
| SQC010735 | 3A (P3-A) | 4213 | 4437 | 0 | 0 | 225 | |
| SQC010736 | 3B (VPg) | 4438 | 4503 | 0 | 0 | 66 | |
| SQC010737 | 3D | 5053 | 0 | 0 | 1 | 1368 | |
| SQC010738 | CDS | 1 | 0 | 0 | 1 | 6420 | |
| SQC010739 | protease 3C | 4504 | 5052 | 0 | 0 | 549 | |
| SQC010740 | VP4/2 | 1 | 430 | 0 | 0 | 430 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017342 | CDS | 1 | 2140 | 0 | 0 | 2140 | |
| SPC017343 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017344 | 3D | 1685 | 2140 | 0 | 1 | 456 | |
| SPC017345 | 2C (P2-C) | 1079 | 1404 | 0 | 0 | 326 | |
| SPC017346 | 1D (VP1) | 566 | 837 | 0 | 0 | 272 | |
| SPC017347 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC017348 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPC017349 | protease 3C | 1502 | 1684 | 0 | 0 | 183 | |
| SPC017350 | 2A (P2-A) | 838 | 979 | 0 | 0 | 142 | |
| SPC017351 | 2B (P2-B) | 980 | 1078 | 0 | 0 | 99 | |
| SPC017352 | 3A (P3-A) | 1405 | 1479 | 0 | 0 | 75 | |
| SPC017353 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC017354 | 3B (VPg) | 1480 | 1501 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 32499763 | Epidemiology and Phylogenetic Analysis of Viral Respiratory Infections in Vietnam. | 2020 | Front Microbiol | View More |