| RVdb StrainID | CNP00052 | GenBank Accession | OM001408.1 |
| Species | RVC | Sequence Length | 7022 nt |
| Serotype | 7 Checked by RVdb | Serotype (GenBank) | 7 |
| Definition | Rhinovirus C7 strain RvC7/USA/2021/9YB5N5, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | RvC7/USA/2021/9YB5N5 | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 1219379 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC009066 | 1A (VP4) | 560 | 760 | 0 | 0 | 201 | |
| SQC009067 | 1B (VP2) | 761 | 1549 | 0 | 0 | 789 | |
| SQC009068 | 1C (VP3) | 1550 | 2245 | 0 | 0 | 696 | |
| SQC009069 | 1D (VP1) | 2246 | 3061 | 0 | 0 | 816 | |
| SQC009070 | 2A (P2-A) | 3062 | 3487 | 0 | 0 | 426 | |
| SQC009071 | 2B (P2-B) | 3488 | 3778 | 0 | 0 | 291 | |
| SQC009072 | 2C (P2-C) | 3779 | 4753 | 0 | 0 | 975 | |
| SQC009073 | 3'UTR | 6980 | 7022 | 0 | 0 | 43 | |
| SQC009074 | 3A (P3-A) | 4754 | 4981 | 0 | 0 | 228 | |
| SQC009075 | 3B (VPg) | 4982 | 5047 | 0 | 0 | 66 | |
| SQC009076 | 3D | 5597 | 6976 | 0 | 0 | 1380 | |
| SQC009077 | 5'UTR | 0 | 559 | 1 | 0 | 559 | |
| SQC009078 | CDS | 560 | 6979 | 0 | 0 | 6420 | |
| SQC009079 | protease 3C | 5048 | 5596 | 0 | 0 | 549 | |
| SQC009080 | VP4/2 | 560 | 990 | 0 | 0 | 431 | |
| SQC009081 | genome | 1 | 7022 | 1 | 0 | 7022 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC015965 | CDS | 1 | 2139 | 0 | 0 | 2139 | |
| SPC015966 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC015967 | 3D | 1680 | 2139 | 0 | 0 | 460 | |
| SPC015968 | 2C (P2-C) | 1074 | 1398 | 0 | 0 | 325 | |
| SPC015969 | 1D (VP1) | 563 | 834 | 0 | 0 | 272 | |
| SPC015970 | 1B (VP2) | 68 | 330 | 0 | 0 | 263 | |
| SPC015971 | 1C (VP3) | 331 | 562 | 0 | 0 | 232 | |
| SPC015972 | protease 3C | 1497 | 1679 | 0 | 0 | 183 | |
| SPC015973 | 2A (P2-A) | 835 | 975 | 0 | 0 | 141 | |
| SPC015974 | 2B (P2-B) | 976 | 1073 | 0 | 0 | 98 | |
| SPC015975 | 3A (P3-A) | 1399 | 1474 | 0 | 0 | 76 | |
| SPC015976 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC015977 | 3B (VPg) | 1475 | 1496 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |