| RVdb StrainID | CNP00037 | GenBank Accession | ON311157.1 |
| Species | RVC | Sequence Length | 6995 nt |
| Serotype | 36 Checked by RVdb | Serotype (GenBank) | 36 |
| Definition | Rhinovirus C strain C36_4 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | C36_4 | Sampling Date | 2021-05-19 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC009019 | 1A (VP4) | 524 | 724 | 0 | 0 | 201 | |
| SQC009020 | 1B (VP2) | 725 | 1509 | 0 | 0 | 785 | |
| SQC009021 | 1C (VP3) | 1510 | 2218 | 0 | 0 | 709 | |
| SQC009022 | 1D (VP1) | 2219 | 3034 | 0 | 0 | 816 | |
| SQC009023 | 2A (P2-A) | 3035 | 3460 | 0 | 0 | 426 | |
| SQC009024 | 2B (P2-B) | 3461 | 3757 | 0 | 0 | 297 | |
| SQC009025 | 2C (P2-C) | 3758 | 4735 | 0 | 0 | 978 | |
| SQC009026 | 3'UTR | 6959 | 0 | 0 | 1 | 37 | |
| SQC009027 | 3A (P3-A) | 4736 | 4960 | 0 | 0 | 225 | |
| SQC009028 | 3B (VPg) | 4961 | 5026 | 0 | 0 | 66 | |
| SQC009029 | 3D | 5576 | 6955 | 0 | 0 | 1380 | |
| SQC009030 | 5'UTR | 0 | 523 | 1 | 0 | 523 | |
| SQC009031 | CDS | 524 | 6958 | 0 | 0 | 6435 | |
| SQC009032 | protease 3C | 5027 | 5575 | 0 | 0 | 549 | |
| SQC009033 | VP4/2 | 524 | 953 | 0 | 0 | 430 | |
| SQC009034 | genome | 1 | 6995 | 1 | 1 | 6995 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017458 | CDS | 1 | 2144 | 0 | 0 | 2144 | |
| SPC017459 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017460 | 3D | 1685 | 2144 | 0 | 0 | 460 | |
| SPC017461 | 2C (P2-C) | 1079 | 1404 | 0 | 0 | 326 | |
| SPC017462 | 1D (VP1) | 566 | 837 | 0 | 0 | 272 | |
| SPC017463 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC017464 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPC017465 | protease 3C | 1502 | 1684 | 0 | 0 | 183 | |
| SPC017466 | 2A (P2-A) | 838 | 979 | 0 | 0 | 142 | |
| SPC017467 | 2B (P2-B) | 980 | 1078 | 0 | 0 | 99 | |
| SPC017468 | 3A (P3-A) | 1405 | 1479 | 0 | 0 | 75 | |
| SPC017469 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC017470 | 3B (VPg) | 1480 | 1501 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |