| RVdb StrainID | CNP00032 | GenBank Accession | ON311162.1 |
| Species | RVC | Sequence Length | 7049 nt |
| Serotype | 29 Corrected by RVdb | Serotype (GenBank) | 34 |
| Definition | Rhinovirus C34 strain C29_1 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | C29_1 | Sampling Date | 2020-03-30 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 2045075 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC009009 | 1A (VP4) | 607 | 807 | 0 | 0 | 201 | |
| SQC009010 | 1B (VP2) | 808 | 1595 | 0 | 0 | 788 | |
| SQC009011 | 1C (VP3) | 1597 | 2312 | 0 | 0 | 716 | |
| SQC009012 | 1D (VP1) | 2314 | 3129 | 0 | 0 | 816 | |
| SQC009013 | 2C (P2-C) | 3853 | 4830 | 0 | 0 | 978 | |
| SQC009014 | 3D | 5671 | 0 | 0 | 1 | 1379 | |
| SQC009015 | 5'UTR | 1 | 606 | 0 | 0 | 606 | |
| SQC009016 | CDS | 607 | 0 | 0 | 1 | 6443 | |
| SQC009017 | protease 3C | 5122 | 5670 | 0 | 0 | 549 | |
| SQC009018 | VP4/2 | 607 | 1037 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017523 | CDS | 1 | 2147 | 0 | 0 | 2147 | |
| SPC017524 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017525 | 2C (P2-C) | 1083 | 1408 | 0 | 0 | 326 | |
| SPC017526 | 1B (VP2) | 68 | 330 | 0 | 0 | 263 | |
| SPC017527 | 1C (VP3) | 331 | 569 | 0 | 0 | 239 | |
| SPC017528 | protease 3C | 1506 | 1688 | 0 | 0 | 183 | |
| SPC017529 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |