| RVdb StrainID | CNM05995 | GenBank Accession | EF582385.1 |
| Species | RVC | Sequence Length | 7099 nt |
| Serotype | 4 Checked by RVdb | Serotype (GenBank) | 4 |
| Definition | Rhinovirus C4, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | 24 | Sampling Date | from 2004-11 to 2005-10 |
| Sampling Country | China | Sampling location | Hong Kong |
| Isolation Source | nasopharyngeal aspirates of patients | NCBI Taxon ID | 2045077 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC008530 | 1A (VP4) | 616 | 816 | 0 | 0 | 201 | |
| SQC008531 | 1B (VP2) | 817 | 1599 | 0 | 0 | 783 | |
| SQC008532 | 1C (VP3) | 1600 | 2304 | 0 | 0 | 705 | |
| SQC008533 | 1D (VP1) | 2305 | 3126 | 0 | 0 | 822 | |
| SQC008534 | 2A (P2-A) | 3127 | 3552 | 0 | 0 | 426 | |
| SQC008535 | 2B (P2-B) | 3553 | 3849 | 0 | 0 | 297 | |
| SQC008536 | 2C (P2-C) | 3850 | 4827 | 0 | 0 | 978 | |
| SQC008537 | 3'UTR | 7051 | 7098 | 0 | 0 | 48 | |
| SQC008538 | 3A (P3-A) | 4828 | 5052 | 0 | 0 | 225 | |
| SQC008539 | 3B (VPg) | 5053 | 5118 | 0 | 0 | 66 | |
| SQC008540 | 3D | 5668 | 7047 | 0 | 0 | 1380 | |
| SQC008541 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQC008542 | CDS | 616 | 7050 | 0 | 0 | 6435 | |
| SQC008543 | protease 3C | 5119 | 5667 | 0 | 0 | 549 | |
| SQC008544 | VP4/2 | 616 | 1046 | 0 | 0 | 431 | |
| SQC008545 | genome | 1 | 7099 | 0 | 0 | 7099 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC000177 | CDS | 1 | 2144 | 0 | 0 | 2144 | |
| SPC000178 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC000179 | 3D | 1685 | 2144 | 0 | 0 | 460 | |
| SPC000180 | 2C (P2-C) | 1079 | 1404 | 0 | 0 | 326 | |
| SPC000181 | 1D (VP1) | 564 | 837 | 0 | 0 | 274 | |
| SPC000182 | 1B (VP2) | 68 | 328 | 0 | 0 | 261 | |
| SPC000183 | 1C (VP3) | 329 | 563 | 0 | 0 | 235 | |
| SPC000184 | protease 3C | 1502 | 1684 | 0 | 0 | 183 | |
| SPC000185 | 2A (P2-A) | 838 | 979 | 0 | 0 | 142 | |
| SPC000186 | 2B (P2-B) | 980 | 1078 | 0 | 0 | 99 | |
| SPC000187 | 3A (P3-A) | 1405 | 1479 | 0 | 0 | 75 | |
| SPC000188 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC000189 | 3B (VPg) | 1480 | 1501 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17804649 | Clinical features and complete genome characterization of a distinct human rhinovirus (HRV) genetic cluster, probably representing a previously undetected HRV species, HRV-C, associated with acute respiratory illness in children. | 2007 | J Clin Microbiol | View More |