| RVdb StrainID | CNM05220 | GenBank Accession | HQ123443.2 |
| Species | RVC | Sequence Length | 6429 nt |
| Serotype | 1 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Human rhinovirus C strain CU184 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | CU184 | Sampling Date | 2006-09-04 |
| Sampling Country | Thailand | Sampling location | King Chulalongkorn Memorial Hospital |
| Isolation Source | nasopharyngeal aspirates of patients | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC008186 | 1A (VP4) | 1 | 207 | 0 | 0 | 207 | |
| SQC008187 | 1B (VP2) | 208 | 993 | 0 | 0 | 786 | |
| SQC008188 | 1C (VP3) | 994 | 1695 | 0 | 0 | 702 | |
| SQC008189 | 1D (VP1) | 1696 | 2511 | 0 | 0 | 816 | |
| SQC008190 | 2A (P2-A) | 2512 | 2934 | 0 | 0 | 423 | |
| SQC008191 | 2B (P2-B) | 2935 | 3228 | 0 | 0 | 294 | |
| SQC008192 | 2C (P2-C) | 3229 | 4203 | 0 | 0 | 975 | |
| SQC008193 | 3A (P3-A) | 4204 | 4431 | 0 | 0 | 228 | |
| SQC008194 | 3B (VPg) | 4432 | 4497 | 0 | 0 | 66 | |
| SQC008195 | 3D | 5047 | 6426 | 0 | 0 | 1380 | |
| SQC008196 | CDS | 1 | 6429 | 0 | 0 | 6429 | |
| SQC008197 | protease 3C | 4498 | 5046 | 0 | 0 | 549 | |
| SQC008198 | VP4/2 | 1 | 431 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC001639 | CDS | 1 | 2142 | 0 | 0 | 2142 | |
| SPC001640 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC001641 | 3D | 1683 | 2142 | 0 | 0 | 460 | |
| SPC001642 | 2C (P2-C) | 1077 | 1401 | 0 | 0 | 325 | |
| SPC001643 | 1B (VP2) | 68 | 331 | 0 | 0 | 264 | |
| SPC001644 | 1C (VP3) | 332 | 566 | 0 | 0 | 235 | |
| SPC001645 | protease 3C | 1500 | 1682 | 0 | 0 | 183 | |
| SPC001646 | 2A (P2-A) | 838 | 978 | 0 | 0 | 141 | |
| SPC001647 | 2B (P2-B) | 979 | 1076 | 0 | 0 | 98 | |
| SPC001648 | 3A (P3-A) | 1402 | 1477 | 0 | 0 | 76 | |
| SPC001649 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC001650 | 3B (VPg) | 1478 | 1499 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 21214911 | Complete coding sequence characterization and comparative analysis of the putative novel human rhinovirus (HRV) species C and B. | 2011 | Virol J | View More |