RVdb StrainID CNM04970 GenBank Accession JF317017.1
Species RVC Sequence Length 7164 nt
Serotype 12  Added by RVdb Serotype (GenBank) -N/A-
Definition Human rhinovirus C isolate LZY101, complete genome GenBank Submission Date 2022-11-06
Strain Name LZY101 Sampling Date from 2008-12 to 2019-12
Sampling Country China Sampling location Guangdong Panyu Maternal and Child Health Hospital
Isolation Source nasopharyngeal aspirates of patients NCBI Taxon ID 463676
Sequencing Technology -N/A- Assembly Method -N/A-

Download selected NT sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SQC008050 1A (VP4) 617 817 0 0 201
SQC008051 1B (VP2) 818 1612 0 0 795
SQC008052 1C (VP3) 1613 2329 0 0 717
SQC008053 1D (VP1) 2330 3160 0 0 831
SQC008054 2A (P2-A) 3161 3586 0 0 426
SQC008055 2B (P2-B) 3587 3883 0 0 297
SQC008056 2C (P2-C) 3884 4861 0 0 978
SQC008057 3'UTR 7085 7124 0 0 40
SQC008058 3A (P3-A) 4862 5086 0 0 225
SQC008059 3B (VPg) 5087 5152 0 0 66
SQC008060 3D 5702 7081 0 0 1380
SQC008061 5'UTR 1 616 0 0 616
SQC008062 CDS 617 7084 0 0 6468
SQC008063 protease 3C 5153 5701 0 0 549
SQC008064 VP4/2 617 1051 0 0 435
SQC008065 genome 1 7164 0 0 7164
Download selected AA sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SPC002209 CDS 1 2155 0 0 2155
SPC002210 VP4/2 1 145 0 0 145
SPC002211 3D 1696 2155 0 0 460
SPC002212 2C (P2-C) 1090 1415 0 0 326
SPC002213 1D (VP1) 570 848 0 0 279
SPC002214 1B (VP2) 68 332 0 0 265
SPC002215 1C (VP3) 333 569 0 0 237
SPC002216 protease 3C 1513 1695 0 0 183
SPC002217 2A (P2-A) 849 990 0 0 142
SPC002218 2B (P2-B) 991 1089 0 0 99
SPC002219 3A (P3-A) 1416 1490 0 0 75
SPC002220 1A (VP4) 1 67 0 0 67
SPC002221 3B (VPg) 1491 1512 0 0 22