| RVdb StrainID | CNM02865 | GenBank Accession | LC428177.1 |
| Species | RVC | Sequence Length | 7033 nt |
| Serotype | 18 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C C18-NIID JPN-2014 gene for polyprotein, partial cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | C18-NIID JPN-2014 | Sampling Date | 2014-03-05 |
| Sampling Country | Japan | Sampling location | Tokyo |
| Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC006770 | 1A (VP4) | 592 | 792 | 0 | 0 | 201 | |
| SQC006771 | 1B (VP2) | 793 | 1578 | 0 | 0 | 786 | |
| SQC006772 | 1C (VP3) | 1579 | 2295 | 0 | 0 | 717 | |
| SQC006773 | 1D (VP1) | 2296 | 3135 | 0 | 0 | 840 | |
| SQC006774 | 2A (P2-A) | 3136 | 3561 | 0 | 0 | 426 | |
| SQC006775 | 2B (P2-B) | 3562 | 3858 | 0 | 0 | 297 | |
| SQC006776 | 2C (P2-C) | 3859 | 4836 | 0 | 0 | 978 | |
| SQC006777 | 3A (P3-A) | 4837 | 5061 | 0 | 0 | 225 | |
| SQC006778 | 3B (VPg) | 5062 | 5127 | 0 | 0 | 66 | |
| SQC006779 | 3D | 5677 | 0 | 0 | 1 | 1357 | |
| SQC006780 | 5'UTR | 0 | 591 | 1 | 0 | 591 | |
| SQC006781 | CDS | 592 | 0 | 0 | 1 | 6442 | |
| SQC006782 | protease 3C | 5128 | 5676 | 0 | 0 | 549 | |
| SQC006783 | VP4/2 | 592 | 1022 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC010621 | CDS | 1 | 2147 | 0 | 0 | 2147 | |
| SPC010622 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC010623 | 3D | 1696 | 2147 | 0 | 1 | 452 | |
| SPC010624 | 2C (P2-C) | 1090 | 1415 | 0 | 0 | 326 | |
| SPC010625 | 1D (VP1) | 567 | 848 | 0 | 0 | 282 | |
| SPC010626 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC010627 | 1C (VP3) | 330 | 566 | 0 | 0 | 237 | |
| SPC010628 | protease 3C | 1513 | 1695 | 0 | 0 | 183 | |
| SPC010629 | 2A (P2-A) | 849 | 990 | 0 | 0 | 142 | |
| SPC010630 | 2B (P2-B) | 991 | 1089 | 0 | 0 | 99 | |
| SPC010631 | 3A (P3-A) | 1416 | 1490 | 0 | 0 | 75 | |
| SPC010632 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC010633 | 3B (VPg) | 1491 | 1512 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 30836639 | Propagation of Rhinovirus C in Differentiated Immortalized Human Airway HBEC3-KT Epithelial Cells. | 2019 | Viruses | View More |