RVdb StrainID | CNM02290 | GenBank Accession | MH459867.1 |
Species | RVC | Sequence Length | 387 nt |
Serotype | -N/A- | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus C isolate KEN/3739/Feb-2016 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
Strain Name | KEN/3739/Feb-2016 | Sampling Date | 2016-02-04 |
Sampling Country | Kenya | Sampling location | rural coastal Kenya |
Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | Sequencher v. v.5.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC006537 | 1A (VP4) | 1 | 201 | 0 | 0 | 201 | |
SQC006538 | CDS | 1 | 0 | 0 | 1 | 387 | |
SQC006539 | VP4/2 | 1 | 0 | 0 | 1 | 387 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC008542 | CDS | 1 | 129 | 0 | 1 | 129 | |
SPC008543 | VP4/2 | 1 | 129 | 0 | 1 | 129 | |
SPC008544 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
30483602 | Human rhinovirus spatial-temporal epidemiology in rural coastal Kenya, 2015-2016, observed through outpatient surveillance. | 2018 | Wellcome Open Res | View More |