| RVdb StrainID | CNM01855 | GenBank Accession | MH828517.1 |
| Species | RVC | Sequence Length | 6423 nt |
| Serotype | 9 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C strain vzhrvc1 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | vzhrvc1 | Sampling Date | 2014-04-10 |
| Sampling Country | Viet Nam | Sampling location | Viet Nam |
| Isolation Source | NT swab | NCBI Taxon ID | 463676 |
| Sequencing Technology | Illumina | Assembly Method | CLC Assembly v. 5.0.4 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC006260 | 1A (VP4) | 1 | 201 | 0 | 0 | 201 | |
| SQC006261 | 1B (VP2) | 202 | 987 | 0 | 0 | 786 | |
| SQC006262 | 1C (VP3) | 988 | 1692 | 0 | 0 | 705 | |
| SQC006263 | 1D (VP1) | 1693 | 2508 | 0 | 0 | 816 | |
| SQC006264 | 2A (P2-A) | 2509 | 2934 | 0 | 0 | 426 | |
| SQC006265 | 2B (P2-B) | 2935 | 3231 | 0 | 0 | 297 | |
| SQC006266 | 2C (P2-C) | 3232 | 4209 | 0 | 0 | 978 | |
| SQC006267 | 3A (P3-A) | 4210 | 4434 | 0 | 0 | 225 | |
| SQC006268 | 3B (VPg) | 4435 | 4500 | 0 | 0 | 66 | |
| SQC006269 | 3D | 5050 | 0 | 0 | 1 | 1374 | |
| SQC006270 | CDS | 1 | 0 | 0 | 1 | 6423 | |
| SQC006271 | protease 3C | 4501 | 5049 | 0 | 0 | 549 | |
| SQC006272 | VP4/2 | 1 | 435 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017303 | CDS | 1 | 2141 | 0 | 0 | 2141 | |
| SPC017304 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017305 | 3D | 1684 | 2141 | 0 | 1 | 458 | |
| SPC017306 | 2C (P2-C) | 1078 | 1403 | 0 | 0 | 326 | |
| SPC017307 | 1D (VP1) | 565 | 836 | 0 | 0 | 272 | |
| SPC017308 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC017309 | 1C (VP3) | 330 | 564 | 0 | 0 | 235 | |
| SPC017310 | protease 3C | 1501 | 1683 | 0 | 0 | 183 | |
| SPC017311 | 2A (P2-A) | 837 | 978 | 0 | 0 | 142 | |
| SPC017312 | 2B (P2-B) | 979 | 1077 | 0 | 0 | 99 | |
| SPC017313 | 3A (P3-A) | 1404 | 1478 | 0 | 0 | 75 | |
| SPC017314 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC017315 | 3B (VPg) | 1479 | 1500 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 32499763 | Epidemiology and Phylogenetic Analysis of Viral Respiratory Infections in Vietnam. | 2020 | Front Microbiol | View More |