RVdb StrainID | CNM01305 | GenBank Accession | MN583158.1 |
Species | RVC | Sequence Length | 452 nt |
Serotype | 23 | Serotype (GenBank) | 23 |
Definition | Rhinovirus C23 strain HRV33.Tun.06.2017 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
Strain Name | HRV33.Tun.06.2017 | Sampling Date | 2017-06 |
Sampling Country | Tunisia | Sampling location | Tunis |
Isolation Source | nasopharyngeal sample | NCBI Taxon ID | 2045067 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC006055 | 1A (VP4) | 1 | 201 | 0 | 0 | 201 | |
SQC006056 | CDS | 0 | 0 | 1 | 1 | 452 | |
SQC006057 | VP4/2 | 1 | 431 | 0 | 0 | 431 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC011530 | CDS | 1 | 150 | 0 | 1 | 150 | |
SPC011531 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
SPC011532 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
34807924 | Phylogeography and phylogeny of Rhinoviruses collected from Severe Acute Respiratory Infection (SARI) cases over successive epidemic periods in Tunisia. | 2021 | PLoS One | View More |