| RVdb StrainID | CNM00055 | GenBank Accession | OM001346.1 |
| Species | RVC | Sequence Length | 7073 nt |
| Serotype | 33 Checked by RVdb | Serotype (GenBank) | 33 |
| Definition | Rhinovirus C33 strain RvC33/USA/2021/6N55CL, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | RvC33/USA/2021/6N55CL | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 2045074 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC004598 | 1A (VP4) | 586 | 786 | 0 | 0 | 201 | |
| SQC004599 | 1B (VP2) | 787 | 1572 | 0 | 0 | 786 | |
| SQC004600 | 1C (VP3) | 1573 | 2283 | 0 | 0 | 711 | |
| SQC004601 | 1D (VP1) | 2284 | 3111 | 0 | 0 | 828 | |
| SQC004602 | 2A (P2-A) | 3112 | 3537 | 0 | 0 | 426 | |
| SQC004603 | 2B (P2-B) | 3538 | 3834 | 0 | 0 | 297 | |
| SQC004604 | 2C (P2-C) | 3835 | 4812 | 0 | 0 | 978 | |
| SQC004605 | 3'UTR | 7036 | 0 | 0 | 1 | 35 | |
| SQC004606 | 3A (P3-A) | 4813 | 5037 | 0 | 0 | 225 | |
| SQC004607 | 3B (VPg) | 5038 | 5103 | 0 | 0 | 66 | |
| SQC004608 | 3D | 5653 | 7032 | 0 | 0 | 1380 | |
| SQC004609 | 5'UTR | 0 | 585 | 1 | 0 | 585 | |
| SQC004610 | CDS | 586 | 7035 | 0 | 0 | 6450 | |
| SQC004611 | protease 3C | 5104 | 5652 | 0 | 0 | 549 | |
| SQC004612 | VP4/2 | 586 | 1016 | 0 | 0 | 431 | |
| SQC004613 | genome | 1 | 7073 | 1 | 1 | 7073 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC015926 | CDS | 1 | 2149 | 0 | 0 | 2149 | |
| SPC015927 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC015928 | 3D | 1690 | 2149 | 0 | 0 | 460 | |
| SPC015929 | 2C (P2-C) | 1084 | 1409 | 0 | 0 | 326 | |
| SPC015930 | 1D (VP1) | 567 | 842 | 0 | 0 | 276 | |
| SPC015931 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC015932 | 1C (VP3) | 330 | 566 | 0 | 0 | 237 | |
| SPC015933 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPC015934 | 2A (P2-A) | 843 | 984 | 0 | 0 | 142 | |
| SPC015935 | 2B (P2-B) | 985 | 1083 | 0 | 0 | 99 | |
| SPC015936 | 3A (P3-A) | 1410 | 1484 | 0 | 0 | 75 | |
| SPC015937 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC015938 | 3B (VPg) | 1485 | 1506 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |