| RVdb StrainID | CNC04794 | GenBank Accession | JN205461.1 |
| Species | RVC | Sequence Length | 7115 nt |
| Serotype | 39 Checked by RVdb | Serotype (GenBank) | 39 |
| Definition | Human rhinovirus C strain WA823M02, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | WA823M02 | Sampling Date | 2002 |
| Sampling Country | Australia | Sampling location | -N/A- |
| Isolation Source | pernasal aspirate | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC003447 | 1A (VP4) | 618 | 818 | 0 | 0 | 201 | |
| SQC003448 | 1B (VP2) | 819 | 1607 | 0 | 0 | 789 | |
| SQC003449 | 1C (VP3) | 1608 | 2306 | 0 | 0 | 699 | |
| SQC003450 | 1D (VP1) | 2307 | 3125 | 0 | 0 | 819 | |
| SQC003451 | 2A (P2-A) | 3126 | 3551 | 0 | 0 | 426 | |
| SQC003452 | 2B (P2-B) | 3552 | 3845 | 0 | 0 | 294 | |
| SQC003453 | 2C (P2-C) | 3846 | 4820 | 0 | 0 | 975 | |
| SQC003454 | 3'UTR | 7047 | 7099 | 0 | 0 | 53 | |
| SQC003455 | 3A (P3-A) | 4821 | 5048 | 0 | 0 | 228 | |
| SQC003456 | 3B (VPg) | 5049 | 5114 | 0 | 0 | 66 | |
| SQC003457 | 3D | 5664 | 7043 | 0 | 0 | 1380 | |
| SQC003458 | 5'UTR | 1 | 617 | 0 | 0 | 617 | |
| SQC003459 | CDS | 618 | 7046 | 0 | 0 | 6429 | |
| SQC003460 | protease 3C | 5115 | 5663 | 0 | 0 | 549 | |
| SQC003461 | VP4/2 | 618 | 1048 | 0 | 0 | 431 | |
| SQC003462 | genome | 1 | 7115 | 0 | 0 | 7115 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC003383 | CDS | 1 | 2142 | 0 | 0 | 2142 | |
| SPC003384 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC003385 | 3D | 1683 | 2142 | 0 | 0 | 460 | |
| SPC003386 | 2C (P2-C) | 1077 | 1401 | 0 | 0 | 325 | |
| SPC003387 | 1D (VP1) | 564 | 836 | 0 | 0 | 273 | |
| SPC003388 | 1B (VP2) | 68 | 330 | 0 | 0 | 263 | |
| SPC003389 | 1C (VP3) | 331 | 563 | 0 | 0 | 233 | |
| SPC003390 | protease 3C | 1500 | 1682 | 0 | 0 | 183 | |
| SPC003391 | 2A (P2-A) | 837 | 978 | 0 | 0 | 142 | |
| SPC003392 | 2B (P2-B) | 979 | 1076 | 0 | 0 | 98 | |
| SPC003393 | 3A (P3-A) | 1402 | 1477 | 0 | 0 | 76 | |
| SPC003394 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC003395 | 3B (VPg) | 1478 | 1499 | 0 | 0 | 22 |