RVdb StrainID | CNC03604 | GenBank Accession | KR060008.1 |
Species | RVC | Sequence Length | 480 nt |
Serotype | 36 | Serotype (GenBank) | 36 |
Definition | Rhinovirus C isolate KENHRV017 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
Strain Name | KENHRV017 | Sampling Date | 2008-07-08 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 463676 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. Version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC002780 | 1A (VP4) | 88 | 288 | 0 | 0 | 201 | |
SQC002781 | 5'UTR | 0 | 87 | 1 | 0 | 87 | |
SQC002782 | CDS | 88 | 0 | 0 | 1 | 393 | |
SQC002783 | VP4/2 | 88 | 0 | 0 | 1 | 393 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC005356 | CDS | 1 | 131 | 0 | 1 | 131 | |
SPC005357 | VP4/2 | 1 | 131 | 0 | 1 | 131 | |
SPC005358 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |