| RVdb StrainID | CNC03059 | GenBank Accession | KY369878.1 |
| Species | RVC | Sequence Length | 7052 nt |
| Serotype | 43 Checked by RVdb | Serotype (GenBank) | 43 |
| Definition | Rhinovirus C43 strain SC174, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | SC174 | Sampling Date | 2016 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 1219413 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC002434 | 1A (VP4) | 611 | 811 | 0 | 0 | 201 | |
| SQC002435 | 1B (VP2) | 812 | 1600 | 0 | 0 | 789 | |
| SQC002436 | 1C (VP3) | 1601 | 2299 | 0 | 0 | 699 | |
| SQC002437 | 1D (VP1) | 2300 | 3115 | 0 | 0 | 816 | |
| SQC002438 | 2A (P2-A) | 3116 | 3538 | 0 | 0 | 423 | |
| SQC002439 | 2B (P2-B) | 3539 | 3832 | 0 | 0 | 294 | |
| SQC002440 | 2C (P2-C) | 3833 | 4807 | 0 | 0 | 975 | |
| SQC002441 | 3A (P3-A) | 4808 | 5035 | 0 | 0 | 228 | |
| SQC002442 | 3B (VPg) | 5036 | 5101 | 0 | 0 | 66 | |
| SQC002443 | 3D | 5651 | 7030 | 0 | 0 | 1380 | |
| SQC002444 | 5'UTR | 1 | 610 | 0 | 0 | 610 | |
| SQC002445 | CDS | 611 | 7033 | 0 | 0 | 6423 | |
| SQC002446 | protease 3C | 5102 | 5650 | 0 | 0 | 549 | |
| SQC002447 | VP4/2 | 611 | 1041 | 0 | 0 | 431 | |
| SQC002448 | genome | 1 | 7052 | 0 | 1 | 7052 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC006483 | CDS | 1 | 2140 | 0 | 0 | 2140 | |
| SPC006484 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC006485 | 3D | 1681 | 2140 | 0 | 0 | 460 | |
| SPC006486 | 2C (P2-C) | 1075 | 1399 | 0 | 0 | 325 | |
| SPC006487 | 1D (VP1) | 564 | 835 | 0 | 0 | 272 | |
| SPC006488 | 1B (VP2) | 68 | 330 | 0 | 0 | 263 | |
| SPC006489 | 1C (VP3) | 331 | 563 | 0 | 0 | 233 | |
| SPC006490 | protease 3C | 1498 | 1680 | 0 | 0 | 183 | |
| SPC006491 | 2A (P2-A) | 836 | 977 | 0 | 0 | 142 | |
| SPC006492 | 2B (P2-B) | 978 | 1074 | 0 | 0 | 97 | |
| SPC006493 | 3A (P3-A) | 1400 | 1475 | 0 | 0 | 76 | |
| SPC006494 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC006495 | 3B (VPg) | 1476 | 1497 | 0 | 0 | 22 |