RVdb StrainID | CNC03019 | GenBank Accession | LC004797.1 |
Species | RVC | Sequence Length | 2325 nt |
Serotype | 25 Added by RVdb | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus C gene for polyprotein, VP2, VP3, VP1 region, partial cds, strain: HRV-C/JPN/Kumamoto31/2011 | GenBank Submission Date | 2022-11-03 |
Strain Name | HRV-C/JPN/Kumamoto31/2011 | Sampling Date | 2011 |
Sampling Country | Japan | Sampling location | Kumamoto |
Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC002406 | 1B (VP2) | 0 | 795 | 1 | 0 | 795 | |
SQC002407 | 1C (VP3) | 796 | 1500 | 0 | 0 | 705 | |
SQC002408 | 1D (VP1) | 1501 | 0 | 0 | 1 | 825 | |
SQC002409 | CDS | 0 | 0 | 1 | 1 | 2325 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC010114 | CDS | 1 | 775 | 0 | 1 | 775 | |
SPC010115 | 1D (VP1) | 501 | 775 | 0 | 1 | 275 | |
SPC010116 | 1B (VP2) | 1 | 265 | 1 | 0 | 265 | |
SPC010117 | 1C (VP3) | 266 | 500 | 0 | 0 | 235 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
25640899 | Molecular evolution of the VP1, VP2, and VP3 genes in human rhinovirus species C. | 2015 | Sci Rep | View More |