RVdb StrainID | CNC02914 | GenBank Accession | LC004902.1 |
Species | RVC | Sequence Length | 2313 nt |
Serotype | 58 Added by RVdb | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus C gene for polyprotein, VP2, VP3, VP1 region, partial cds, strain: HRV-C/JPN/Yokohama15/2008 | GenBank Submission Date | 2022-11-03 |
Strain Name | HRV-C/JPN/Yokohama15/2008 | Sampling Date | 2008 |
Sampling Country | Japan | Sampling location | Kanagawa, Yokohama |
Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC002322 | 1B (VP2) | 0 | 786 | 1 | 0 | 786 | |
SQC002323 | 1C (VP3) | 787 | 1497 | 0 | 0 | 711 | |
SQC002324 | 1D (VP1) | 1498 | 0 | 0 | 1 | 816 | |
SQC002325 | CDS | 0 | 0 | 1 | 1 | 2313 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC010534 | CDS | 1 | 771 | 0 | 1 | 771 | |
SPC010535 | 1D (VP1) | 500 | 771 | 0 | 1 | 272 | |
SPC010536 | 1B (VP2) | 1 | 262 | 1 | 0 | 262 | |
SPC010537 | 1C (VP3) | 263 | 499 | 0 | 0 | 237 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
25640899 | Molecular evolution of the VP1, VP2, and VP3 genes in human rhinovirus species C. | 2015 | Sci Rep | View More |