| RVdb StrainID | CNC01854 | GenBank Accession | MH828518.1 |
| Species | RVC | Sequence Length | 6138 nt |
| Serotype | 46 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C strain vzhrvc2 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | vzhrvc2 | Sampling Date | 2015-08-27 |
| Sampling Country | Viet Nam | Sampling location | -N/A- |
| Isolation Source | NT swab | NCBI Taxon ID | 463676 |
| Sequencing Technology | Illumina | Assembly Method | CLC Assembly v. 5.0.4 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC001827 | 1A (VP4) | 1 | 201 | 0 | 0 | 201 | |
| SQC001828 | 1B (VP2) | 202 | 987 | 0 | 0 | 786 | |
| SQC001829 | 1C (VP3) | 988 | 1695 | 0 | 0 | 708 | |
| SQC001830 | 1D (VP1) | 1696 | 2511 | 0 | 0 | 816 | |
| SQC001831 | 2A (P2-A) | 2512 | 2946 | 0 | 0 | 435 | |
| SQC001832 | 2B (P2-B) | 2947 | 3243 | 0 | 0 | 297 | |
| SQC001833 | 2C (P2-C) | 3244 | 4221 | 0 | 0 | 978 | |
| SQC001834 | 3A (P3-A) | 4222 | 4446 | 0 | 0 | 225 | |
| SQC001835 | 3B (VPg) | 4447 | 4512 | 0 | 0 | 66 | |
| SQC001836 | 3D | 5062 | 0 | 0 | 1 | 1077 | |
| SQC001837 | CDS | 1 | 0 | 0 | 1 | 6138 | |
| SQC001838 | protease 3C | 4513 | 5061 | 0 | 0 | 549 | |
| SQC001839 | VP4/2 | 1 | 431 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017316 | CDS | 1 | 2046 | 0 | 0 | 2046 | |
| SPC017317 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017318 | 3D | 1688 | 2046 | 0 | 1 | 359 | |
| SPC017319 | 2C (P2-C) | 1082 | 1407 | 0 | 0 | 326 | |
| SPC017320 | 1D (VP1) | 566 | 837 | 0 | 0 | 272 | |
| SPC017321 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC017322 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPC017323 | protease 3C | 1505 | 1687 | 0 | 0 | 183 | |
| SPC017324 | 2A (P2-A) | 838 | 982 | 0 | 0 | 145 | |
| SPC017325 | 2B (P2-B) | 983 | 1081 | 0 | 0 | 99 | |
| SPC017326 | 3A (P3-A) | 1408 | 1482 | 0 | 0 | 75 | |
| SPC017327 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC017328 | 3B (VPg) | 1483 | 1504 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 32499763 | Epidemiology and Phylogenetic Analysis of Viral Respiratory Infections in Vietnam. | 2020 | Front Microbiol | View More |