| RVdb StrainID | BNZ01136 | GenBank Accession | KF958309.1 |
| Species | RVB | Sequence Length | 7217 nt |
| Serotype | 72 Checked by RVdb | Serotype (GenBank) | 72 |
| Definition | Rhinovirus B isolate R93, complete genome | GenBank Submission Date | 2022-11-03 |
| Strain Name | R93 | Sampling Date | 2007-09-29 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAStar SeqMan Pro v. 9.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB007523 | 1A (VP4) | 632 | 838 | 0 | 0 | 207 | |
| SQB007524 | 1B (VP2) | 839 | 1624 | 0 | 0 | 786 | |
| SQB007525 | 1C (VP3) | 1625 | 2332 | 0 | 0 | 708 | |
| SQB007526 | 1D (VP1) | 2333 | 3199 | 0 | 0 | 867 | |
| SQB007527 | 2A (P2-A) | 3200 | 3637 | 0 | 0 | 438 | |
| SQB007528 | 2B (P2-B) | 3638 | 3928 | 0 | 0 | 291 | |
| SQB007529 | 2C (P2-C) | 3929 | 4918 | 0 | 0 | 990 | |
| SQB007530 | 3'UTR | 7172 | 7217 | 0 | 0 | 46 | |
| SQB007531 | 3A (P3-A) | 4919 | 5173 | 0 | 0 | 255 | |
| SQB007532 | 3B (VPg) | 5174 | 5242 | 0 | 0 | 69 | |
| SQB007533 | 3D | 5789 | 7168 | 0 | 0 | 1380 | |
| SQB007534 | 5'UTR | 1 | 631 | 0 | 0 | 631 | |
| SQB007535 | CDS | 632 | 7171 | 0 | 0 | 6540 | |
| SQB007536 | protease 3C | 5243 | 5788 | 0 | 0 | 546 | |
| SQB007537 | VP4/2 | 632 | 1068 | 0 | 0 | 437 | |
| SQB007538 | genome | 1 | 7217 | 0 | 0 | 7217 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001924 | protease 3C | 1538 | 1719 | 0 | 0 | 182 | |
| SPB001925 | 3D | 1720 | 2179 | 0 | 0 | 460 | |
| SPB001926 | 3B (VPg) | 1515 | 1537 | 0 | 0 | 23 | |
| SPB001927 | 3A (P3-A) | 1430 | 1514 | 0 | 0 | 85 | |
| SPB001928 | 2C (P2-C) | 1100 | 1429 | 0 | 0 | 330 | |
| SPB001929 | 2B (P2-B) | 1003 | 1099 | 0 | 0 | 97 | |
| SPB001930 | 2A (P2-A) | 857 | 1002 | 0 | 0 | 146 | |
| SPB001931 | 1D (VP1) | 568 | 856 | 0 | 0 | 289 | |
| SPB001932 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001933 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001934 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001935 | CDS | 1 | 2179 | 0 | 0 | 2179 | |
| SPB001936 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24636084 | Effects of rhinovirus species on viral replication and cytokine production. | 2014 | J Allergy Clin Immunol | View More |