RVdb StrainID | BNS01658 | GenBank Accession | AY450541.1 |
Species | RVB | Sequence Length | 1378 nt |
Serotype | 79 Checked by RVdb | Serotype (GenBank) | 79 |
Definition | Human rhinovirus 79 polyprotein mRNA, partial cds | GenBank Submission Date | 2022-11-03 |
Strain Name | 79 | Sampling Date | -N/A- |
Sampling Country | Finland | Sampling location | -N/A- |
Isolation Source | -N/A- | NCBI Taxon ID | 185933 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQB006353 | 1C (VP3) | 1 | 239 | 1 | 0 | 239 | |
SQB006354 | 1D (VP1) | 240 | 1102 | 0 | 0 | 863 | |
SQB006355 | 2A (P2-A) | 1103 | 1378 | 0 | 1 | 276 | |
SQB006356 | CDS | 1 | 1378 | 1 | 1 | 1378 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPB000358 | 2A (P2-A) | 368 | 459 | 0 | 1 | 92 | |
SPB000359 | 1D (VP1) | 80 | 367 | 0 | 0 | 288 | |
SPB000360 | CDS | 1 | 459 | 0 | 1 | 459 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
15722530 | Phylogenetic analysis of human rhinovirus capsid protein VP1 and 2A protease coding sequences confirms shared genus-like relationships with human enteroviruses. | 2005 | J Gen Virol | View More |