RVdb StrainID | BNS01638 | GenBank Accession | DQ473489.1 |
Species | RVB | Sequence Length | 7223 nt |
Serotype | 70 Checked by RVdb | Serotype (GenBank) | 70 |
Definition | Rhinovirus B70, complete genome | GenBank Submission Date | 2022-11-06 |
Strain Name | -N/A- | Sampling Date | -N/A- |
Sampling Country | USA | Sampling location | -N/A- |
Isolation Source | -N/A- | NCBI Taxon ID | 185926 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQB006332 | 1A (VP4) | 623 | 829 | 0 | 0 | 207 | |
SQB006333 | 1B (VP2) | 830 | 1615 | 0 | 0 | 786 | |
SQB006334 | 1C (VP3) | 1616 | 2323 | 0 | 0 | 708 | |
SQB006335 | 1D (VP1) | 2324 | 3217 | 0 | 0 | 894 | |
SQB006336 | 2A (P2-A) | 3218 | 3649 | 0 | 0 | 432 | |
SQB006337 | 2B (P2-B) | 3650 | 3940 | 0 | 0 | 291 | |
SQB006338 | 2C (P2-C) | 3941 | 4930 | 0 | 0 | 990 | |
SQB006339 | 3'UTR | 7184 | 7223 | 0 | 0 | 40 | |
SQB006340 | 3A (P3-A) | 4931 | 5185 | 0 | 0 | 255 | |
SQB006341 | 3B (VPg) | 5186 | 5254 | 0 | 0 | 69 | |
SQB006342 | 3D | 5801 | 7180 | 0 | 0 | 1380 | |
SQB006343 | 5'UTR | 1 | 622 | 0 | 0 | 622 | |
SQB006344 | CDS | 623 | 7183 | 0 | 0 | 6561 | |
SQB006345 | protease 3C | 5255 | 5800 | 0 | 0 | 546 | |
SQB006346 | VP4/2 | 623 | 1059 | 0 | 0 | 437 | |
SQB006347 | genome | 1 | 7223 | 0 | 0 | 7223 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPB000431 | protease 3C | 1545 | 1726 | 0 | 0 | 182 | |
SPB000432 | 3D | 1727 | 2186 | 0 | 0 | 460 | |
SPB000433 | 3B (VPg) | 1522 | 1544 | 0 | 0 | 23 | |
SPB000434 | 3A (P3-A) | 1437 | 1521 | 0 | 0 | 85 | |
SPB000435 | 2C (P2-C) | 1107 | 1436 | 0 | 0 | 330 | |
SPB000436 | 2B (P2-B) | 1010 | 1106 | 0 | 0 | 97 | |
SPB000437 | 2A (P2-A) | 866 | 1009 | 0 | 0 | 144 | |
SPB000438 | 1D (VP1) | 568 | 865 | 0 | 0 | 298 | |
SPB000439 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
SPB000440 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
SPB000441 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPB000442 | CDS | 1 | 2186 | 0 | 0 | 2186 | |
SPB000443 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |