| RVdb StrainID | BNS00538 | GenBank Accession | MH899592.1 |
| Species | RVB | Sequence Length | 6975 nt |
| Serotype | 107 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | MAG: Rhinovirus B isolate HRV_B_SK002 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | HRV_B_SK002 | Sampling Date | 2015-10 |
| Sampling Country | -N/A- | Sampling location | -N/A- |
| Isolation Source | skin swab | NCBI Taxon ID | 147712 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB005513 | 1A (VP4) | 395 | 601 | 0 | 0 | 207 | |
| SQB005514 | 1B (VP2) | 602 | 1384 | 0 | 0 | 783 | |
| SQB005515 | 1C (VP3) | 1385 | 2092 | 0 | 0 | 708 | |
| SQB005516 | 1D (VP1) | 2093 | 2953 | 0 | 0 | 861 | |
| SQB005517 | 2A (P2-A) | 2954 | 3394 | 0 | 0 | 441 | |
| SQB005518 | 2B (P2-B) | 3395 | 3685 | 0 | 0 | 291 | |
| SQB005519 | 2C (P2-C) | 3686 | 4669 | 0 | 0 | 984 | |
| SQB005520 | 3'UTR | 6923 | 6967 | 0 | 0 | 45 | |
| SQB005521 | 3A (P3-A) | 4670 | 4924 | 0 | 0 | 255 | |
| SQB005522 | 3B (VPg) | 4925 | 4993 | 0 | 0 | 69 | |
| SQB005523 | 3D | 5540 | 6919 | 0 | 0 | 1380 | |
| SQB005524 | 5'UTR | 1 | 289 | 1 | 0 | 289 | |
| SQB005525 | CDS | 290 | 6922 | 0 | 0 | 6633 | |
| SQB005526 | protease 3C | 4994 | 5539 | 0 | 0 | 546 | |
| SQB005527 | VP4/2 | 395 | 831 | 0 | 0 | 437 | |
| SQB005528 | genome | 1 | 6975 | 1 | 0 | 6975 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB003319 | protease 3C | 1569 | 1750 | 0 | 0 | 182 | |
| SPB003320 | 3D | 1751 | 2210 | 0 | 0 | 460 | |
| SPB003321 | 3B (VPg) | 1546 | 1568 | 0 | 0 | 23 | |
| SPB003322 | 3A (P3-A) | 1461 | 1545 | 0 | 0 | 85 | |
| SPB003323 | 2C (P2-C) | 1133 | 1460 | 0 | 0 | 328 | |
| SPB003324 | 2B (P2-B) | 1036 | 1132 | 0 | 0 | 97 | |
| SPB003325 | 2A (P2-A) | 889 | 1035 | 0 | 0 | 147 | |
| SPB003326 | 1D (VP1) | 602 | 888 | 0 | 0 | 287 | |
| SPB003327 | 1C (VP3) | 366 | 601 | 0 | 0 | 236 | |
| SPB003328 | 1B (VP2) | 105 | 365 | 0 | 0 | 261 | |
| SPB003329 | 1A (VP4) | 36 | 104 | 0 | 0 | 69 | |
| SPB003330 | CDS | 1 | 2210 | 0 | 0 | 2210 | |
| SPB003331 | VP4/2 | 36 | 180 | 0 | 0 | 145 |