| RVdb StrainID | BNS00038 | GenBank Accession | OM001381.1 |
| Species | RVB | Sequence Length | 7157 nt |
| Serotype | 6 Checked by RVdb | Serotype (GenBank) | 6 |
| Definition | Rhinovirus B6 strain RvB6/USA/2021/HSEJEK, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | RvB6/USA/2021/HSEJEK | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 147681 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB004895 | 1A (VP4) | 583 | 789 | 0 | 0 | 207 | |
| SQB004896 | 1B (VP2) | 790 | 1575 | 0 | 0 | 786 | |
| SQB004897 | 1C (VP3) | 1576 | 2283 | 0 | 0 | 708 | |
| SQB004898 | 1D (VP1) | 2284 | 3153 | 0 | 0 | 870 | |
| SQB004899 | 2A (P2-A) | 3154 | 3591 | 0 | 0 | 438 | |
| SQB004900 | 2B (P2-B) | 3592 | 3882 | 0 | 0 | 291 | |
| SQB004901 | 2C (P2-C) | 3883 | 4872 | 0 | 0 | 990 | |
| SQB004902 | 3'UTR | 7126 | 7157 | 0 | 1 | 32 | |
| SQB004903 | 3A (P3-A) | 4873 | 5127 | 0 | 0 | 255 | |
| SQB004904 | 3B (VPg) | 5128 | 5196 | 0 | 0 | 69 | |
| SQB004905 | 3D | 5743 | 7122 | 0 | 0 | 1380 | |
| SQB004906 | 5'UTR | 1 | 582 | 1 | 0 | 582 | |
| SQB004907 | CDS | 583 | 7125 | 0 | 0 | 6543 | |
| SQB004908 | protease 3C | 5197 | 5742 | 0 | 0 | 546 | |
| SQB004909 | VP4/2 | 583 | 1019 | 0 | 0 | 437 | |
| SQB004910 | genome | 1 | 7157 | 1 | 1 | 7157 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB005697 | protease 3C | 1539 | 1720 | 0 | 0 | 182 | |
| SPB005698 | 3D | 1721 | 2180 | 0 | 0 | 460 | |
| SPB005699 | 3B (VPg) | 1516 | 1538 | 0 | 0 | 23 | |
| SPB005700 | 3A (P3-A) | 1431 | 1515 | 0 | 0 | 85 | |
| SPB005701 | 2C (P2-C) | 1101 | 1430 | 0 | 0 | 330 | |
| SPB005702 | 2B (P2-B) | 1004 | 1100 | 0 | 0 | 97 | |
| SPB005703 | 2A (P2-A) | 858 | 1003 | 0 | 0 | 146 | |
| SPB005704 | 1D (VP1) | 568 | 857 | 0 | 0 | 290 | |
| SPB005705 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB005706 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB005707 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB005708 | CDS | 1 | 2180 | 0 | 0 | 2180 | |
| SPB005709 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |