RVdb StrainID | BNS00033 | GenBank Accession | OM001422.1 |
Species | RVB | Sequence Length | 7046 nt |
Serotype | 70 Checked by RVdb | Serotype (GenBank) | 70 |
Definition | Rhinovirus B70 strain RvB70/USA/2021/D2PNJ2, complete genome | GenBank Submission Date | 2022-11-06 |
Strain Name | RvB70/USA/2021/D2PNJ2 | Sampling Date | 2021 |
Sampling Country | USA | Sampling location | King County, Washington |
Isolation Source | -N/A- | NCBI Taxon ID | 185926 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQB004879 | 1A (VP4) | 446 | 652 | 0 | 0 | 207 | |
SQB004880 | 1B (VP2) | 653 | 1438 | 0 | 0 | 786 | |
SQB004881 | 1C (VP3) | 1439 | 2146 | 0 | 0 | 708 | |
SQB004882 | 1D (VP1) | 2147 | 3034 | 0 | 0 | 888 | |
SQB004883 | 2A (P2-A) | 3035 | 3472 | 0 | 0 | 438 | |
SQB004884 | 2B (P2-B) | 3473 | 3763 | 0 | 0 | 291 | |
SQB004885 | 2C (P2-C) | 3764 | 4753 | 0 | 0 | 990 | |
SQB004886 | 3'UTR | 7007 | 7046 | 0 | 0 | 40 | |
SQB004887 | 3A (P3-A) | 4754 | 5008 | 0 | 0 | 255 | |
SQB004888 | 3B (VPg) | 5009 | 5077 | 0 | 0 | 69 | |
SQB004889 | 3D | 5624 | 7003 | 0 | 0 | 1380 | |
SQB004890 | 5'UTR | 1 | 445 | 1 | 0 | 445 | |
SQB004891 | CDS | 446 | 7006 | 0 | 0 | 6561 | |
SQB004892 | protease 3C | 5078 | 5623 | 0 | 0 | 546 | |
SQB004893 | VP4/2 | 446 | 882 | 0 | 0 | 437 | |
SQB004894 | genome | 1 | 7046 | 1 | 0 | 7046 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPB005762 | protease 3C | 1545 | 1726 | 0 | 0 | 182 | |
SPB005763 | 3D | 1727 | 2186 | 0 | 0 | 460 | |
SPB005764 | 3B (VPg) | 1522 | 1544 | 0 | 0 | 23 | |
SPB005765 | 3A (P3-A) | 1437 | 1521 | 0 | 0 | 85 | |
SPB005766 | 2C (P2-C) | 1107 | 1436 | 0 | 0 | 330 | |
SPB005767 | 2B (P2-B) | 1010 | 1106 | 0 | 0 | 97 | |
SPB005768 | 2A (P2-A) | 866 | 1009 | 0 | 0 | 144 | |
SPB005769 | 1D (VP1) | 568 | 865 | 0 | 0 | 298 | |
SPB005770 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
SPB005771 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
SPB005772 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPB005773 | CDS | 1 | 2186 | 0 | 0 | 2186 | |
SPB005774 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |