| RVdb StrainID | BNS00023 | GenBank Accession | ON311184.1 |
| Species | RVB | Sequence Length | 7181 nt |
| Serotype | 106 Corrected by RVdb | Serotype (GenBank) | 48 |
| Definition | Rhinovirus B48 strain B48_1 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | B48_1 | Sampling Date | 2020-11-11 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 147679 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB004848 | 1A (VP4) | 607 | 813 | 0 | 0 | 207 | |
| SQB004849 | 1B (VP2) | 814 | 1599 | 0 | 0 | 786 | |
| SQB004850 | 1C (VP3) | 1600 | 2307 | 0 | 0 | 708 | |
| SQB004851 | 1D (VP1) | 2308 | 3192 | 0 | 0 | 885 | |
| SQB004852 | 2A (P2-A) | 3193 | 3627 | 0 | 0 | 435 | |
| SQB004853 | 2B (P2-B) | 3628 | 3918 | 0 | 0 | 291 | |
| SQB004854 | 2C (P2-C) | 3919 | 4908 | 0 | 0 | 990 | |
| SQB004855 | 3A (P3-A) | 4909 | 5163 | 0 | 0 | 255 | |
| SQB004856 | 3B (VPg) | 5164 | 5232 | 0 | 0 | 69 | |
| SQB004857 | 3D | 5779 | 7158 | 0 | 0 | 1380 | |
| SQB004858 | 5'UTR | 1 | 606 | 1 | 0 | 606 | |
| SQB004859 | CDS | 607 | 7161 | 0 | 0 | 6555 | |
| SQB004860 | protease 3C | 5233 | 5778 | 0 | 0 | 546 | |
| SQB004861 | VP4/2 | 607 | 1043 | 0 | 0 | 437 | |
| SQB004862 | genome | 1 | 7181 | 1 | 1 | 7181 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB006277 | protease 3C | 1543 | 1724 | 0 | 0 | 182 | |
| SPB006278 | 3D | 1725 | 2184 | 0 | 0 | 460 | |
| SPB006279 | 3B (VPg) | 1520 | 1542 | 0 | 0 | 23 | |
| SPB006280 | 3A (P3-A) | 1435 | 1519 | 0 | 0 | 85 | |
| SPB006281 | 2C (P2-C) | 1105 | 1434 | 0 | 0 | 330 | |
| SPB006282 | 2B (P2-B) | 1008 | 1104 | 0 | 0 | 97 | |
| SPB006283 | 2A (P2-A) | 864 | 1007 | 0 | 0 | 144 | |
| SPB006284 | 1D (VP1) | 568 | 863 | 0 | 0 | 296 | |
| SPB006285 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB006286 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB006287 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB006288 | CDS | 1 | 2184 | 0 | 0 | 2184 | |
| SPB006289 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |