| RVdb StrainID | BNS00008 | GenBank Accession | ON311199.1 |
| Species | RVB | Sequence Length | 7083 nt |
| Serotype | 27 Checked by RVdb | Serotype (GenBank) | 27 |
| Definition | Rhinovirus B27 strain B27_4 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | B27_4 | Sampling Date | 2020-10-03 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185900 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB004803 | 1A (VP4) | 516 | 722 | 0 | 0 | 207 | |
| SQB004804 | 1B (VP2) | 723 | 1508 | 0 | 0 | 786 | |
| SQB004805 | 1C (VP3) | 1509 | 2216 | 0 | 0 | 708 | |
| SQB004806 | 1D (VP1) | 2217 | 3077 | 0 | 0 | 861 | |
| SQB004807 | 2A (P2-A) | 3078 | 3518 | 0 | 0 | 441 | |
| SQB004808 | 2B (P2-B) | 3519 | 3809 | 0 | 0 | 291 | |
| SQB004809 | 2C (P2-C) | 3810 | 4799 | 0 | 0 | 990 | |
| SQB004810 | 3A (P3-A) | 4800 | 5054 | 0 | 0 | 255 | |
| SQB004811 | 3B (VPg) | 5055 | 5123 | 0 | 0 | 69 | |
| SQB004812 | 3D | 5670 | 7049 | 0 | 0 | 1380 | |
| SQB004813 | 5'UTR | 1 | 515 | 1 | 0 | 515 | |
| SQB004814 | CDS | 516 | 7052 | 0 | 0 | 6537 | |
| SQB004815 | protease 3C | 5124 | 5669 | 0 | 0 | 546 | |
| SQB004816 | VP4/2 | 516 | 952 | 0 | 0 | 437 | |
| SQB004817 | genome | 1 | 7083 | 1 | 1 | 7083 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB006472 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB006473 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB006474 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB006475 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB006476 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB006477 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB006478 | 2A (P2-A) | 857 | 1001 | 0 | 0 | 145 | |
| SPB006479 | 1D (VP1) | 568 | 856 | 0 | 0 | 289 | |
| SPB006480 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB006481 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB006482 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB006483 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB006484 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |