| RVdb StrainID | BNP01642 | GenBank Accession | DQ473485.1 |
| Species | RVB | Sequence Length | 7208 nt |
| Serotype | 3 Checked by RVdb | Serotype (GenBank) | 3 |
| Definition | Rhinovirus B3, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 44130 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB004669 | 1A (VP4) | 627 | 833 | 0 | 0 | 207 | |
| SQB004670 | 1B (VP2) | 834 | 1619 | 0 | 0 | 786 | |
| SQB004671 | 1C (VP3) | 1620 | 2327 | 0 | 0 | 708 | |
| SQB004672 | 1D (VP1) | 2328 | 3197 | 0 | 0 | 870 | |
| SQB004673 | 2A (P2-A) | 3198 | 3629 | 0 | 0 | 432 | |
| SQB004674 | 2B (P2-B) | 3630 | 3920 | 0 | 0 | 291 | |
| SQB004675 | 2C (P2-C) | 3921 | 4910 | 0 | 0 | 990 | |
| SQB004676 | 3'UTR | 7164 | 7208 | 0 | 1 | 45 | |
| SQB004677 | 3A (P3-A) | 4911 | 5165 | 0 | 0 | 255 | |
| SQB004678 | 3B (VPg) | 5166 | 5234 | 0 | 0 | 69 | |
| SQB004679 | 3D | 5781 | 7160 | 0 | 0 | 1380 | |
| SQB004680 | 5'UTR | 1 | 626 | 0 | 0 | 626 | |
| SQB004681 | CDS | 627 | 7163 | 0 | 0 | 6537 | |
| SQB004682 | protease 3C | 5235 | 5780 | 0 | 0 | 546 | |
| SQB004683 | VP4/2 | 627 | 1063 | 0 | 0 | 437 | |
| SQB004684 | genome | 1 | 7208 | 0 | 1 | 7208 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB000379 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB000380 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB000381 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB000382 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB000383 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB000384 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB000385 | 2A (P2-A) | 858 | 1001 | 0 | 0 | 144 | |
| SPB000386 | 1D (VP1) | 568 | 857 | 0 | 0 | 290 | |
| SPB000387 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB000388 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB000389 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB000390 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB000391 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |