| RVdb StrainID | BNP00012 | GenBank Accession | ON311195.1 |
| Species | RVB | Sequence Length | 6982 nt |
| Serotype | 27 Checked by RVdb | Serotype (GenBank) | 27 |
| Definition | Rhinovirus B27 strain B27_8 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | B27_8 | Sampling Date | 2020-10-09 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185900 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB003147 | 1A (VP4) | 425 | 631 | 0 | 0 | 207 | |
| SQB003148 | 1B (VP2) | 632 | 1417 | 0 | 0 | 786 | |
| SQB003149 | 1C (VP3) | 1418 | 2125 | 0 | 0 | 708 | |
| SQB003150 | 1D (VP1) | 2126 | 2986 | 0 | 0 | 861 | |
| SQB003151 | 2A (P2-A) | 2987 | 3427 | 0 | 0 | 441 | |
| SQB003152 | 2B (P2-B) | 3428 | 3718 | 0 | 0 | 291 | |
| SQB003153 | 2C (P2-C) | 3719 | 4708 | 0 | 0 | 990 | |
| SQB003154 | 3A (P3-A) | 4709 | 4963 | 0 | 0 | 255 | |
| SQB003155 | 3B (VPg) | 4964 | 5032 | 0 | 0 | 69 | |
| SQB003156 | 3D | 5579 | 6958 | 0 | 0 | 1380 | |
| SQB003157 | 5'UTR | 1 | 424 | 1 | 0 | 424 | |
| SQB003158 | CDS | 425 | 6961 | 0 | 0 | 6537 | |
| SQB003159 | protease 3C | 5033 | 5578 | 0 | 0 | 546 | |
| SQB003160 | VP4/2 | 425 | 861 | 0 | 0 | 437 | |
| SQB003161 | genome | 1 | 6982 | 1 | 1 | 6982 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB006420 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB006421 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB006422 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB006423 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB006424 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB006425 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB006426 | 2A (P2-A) | 857 | 1001 | 0 | 0 | 145 | |
| SPB006427 | 1D (VP1) | 568 | 856 | 0 | 0 | 289 | |
| SPB006428 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB006429 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB006430 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB006431 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB006432 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |