RVdb StrainID | BNM01640 | GenBank Accession | DQ473487.1 |
Species | RVB | Sequence Length | 7224 nt |
Serotype | 35 Checked by RVdb | Serotype (GenBank) | 35 |
Definition | Rhinovirus B35, complete genome | GenBank Submission Date | 2022-11-06 |
Strain Name | -N/A- | Sampling Date | -N/A- |
Sampling Country | USA | Sampling location | -N/A- |
Isolation Source | -N/A- | NCBI Taxon ID | 167329 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQB003002 | 1A (VP4) | 623 | 829 | 0 | 0 | 207 | |
SQB003003 | 1B (VP2) | 830 | 1627 | 0 | 0 | 798 | |
SQB003004 | 1C (VP3) | 1628 | 2335 | 0 | 0 | 708 | |
SQB003005 | 1D (VP1) | 2336 | 3205 | 0 | 0 | 870 | |
SQB003006 | 2A (P2-A) | 3206 | 3637 | 0 | 0 | 432 | |
SQB003007 | 2B (P2-B) | 3638 | 3928 | 0 | 0 | 291 | |
SQB003008 | 2C (P2-C) | 3929 | 4918 | 0 | 0 | 990 | |
SQB003009 | 3'UTR | 7172 | 7224 | 0 | 0 | 53 | |
SQB003010 | 3A (P3-A) | 4919 | 5173 | 0 | 0 | 255 | |
SQB003011 | 3B (VPg) | 5174 | 5242 | 0 | 0 | 69 | |
SQB003012 | 3D | 5789 | 7168 | 0 | 0 | 1380 | |
SQB003013 | 5'UTR | 1 | 622 | 0 | 0 | 622 | |
SQB003014 | CDS | 623 | 7171 | 0 | 0 | 6549 | |
SQB003015 | protease 3C | 5243 | 5788 | 0 | 0 | 546 | |
SQB003016 | VP4/2 | 623 | 1059 | 0 | 0 | 437 | |
SQB003017 | genome | 1 | 7224 | 0 | 0 | 7224 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPB000405 | protease 3C | 1541 | 1722 | 0 | 0 | 182 | |
SPB000406 | 3D | 1723 | 2182 | 0 | 0 | 460 | |
SPB000407 | 3B (VPg) | 1518 | 1540 | 0 | 0 | 23 | |
SPB000408 | 3A (P3-A) | 1433 | 1517 | 0 | 0 | 85 | |
SPB000409 | 2C (P2-C) | 1103 | 1432 | 0 | 0 | 330 | |
SPB000410 | 2B (P2-B) | 1006 | 1102 | 0 | 0 | 97 | |
SPB000411 | 2A (P2-A) | 862 | 1005 | 0 | 0 | 144 | |
SPB000412 | 1D (VP1) | 572 | 861 | 0 | 0 | 290 | |
SPB000413 | 1C (VP3) | 336 | 571 | 0 | 0 | 236 | |
SPB000414 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
SPB000415 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPB000416 | CDS | 1 | 2182 | 0 | 0 | 2182 | |
SPB000417 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |