RVdb StrainID | BNM01630 | GenBank Accession | EF173423.1 |
Species | RVB | Sequence Length | 7216 nt |
Serotype | 37 Checked by RVdb | Serotype (GenBank) | 37 |
Definition | Human rhinovirus 37, complete genome | GenBank Submission Date | 2022-11-06 |
Strain Name | -N/A- | Sampling Date | -N/A- |
Sampling Country | -N/A- | Sampling location | -N/A- |
Isolation Source | -N/A- | NCBI Taxon ID | 147680 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQB002983 | 1A (VP4) | 631 | 837 | 0 | 0 | 207 | |
SQB002984 | 1B (VP2) | 838 | 1623 | 0 | 0 | 786 | |
SQB002985 | 1C (VP3) | 1624 | 2331 | 0 | 0 | 708 | |
SQB002986 | 1D (VP1) | 2332 | 3195 | 0 | 0 | 864 | |
SQB002987 | 2A (P2-A) | 3196 | 3632 | 0 | 0 | 437 | |
SQB002988 | 2B (P2-B) | 3633 | 3924 | 0 | 0 | 292 | |
SQB002989 | 2C (P2-C) | 3925 | 4914 | 0 | 0 | 990 | |
SQB002990 | 3'UTR | 7168 | 7216 | 0 | 0 | 49 | |
SQB002991 | 3A (P3-A) | 4915 | 5169 | 0 | 0 | 255 | |
SQB002992 | 3B (VPg) | 5170 | 5238 | 0 | 0 | 69 | |
SQB002993 | 3D | 5785 | 7164 | 0 | 0 | 1380 | |
SQB002994 | 5'UTR | 1 | 630 | 0 | 0 | 630 | |
SQB002995 | CDS | 631 | 7167 | 0 | 0 | 6537 | |
SQB002996 | protease 3C | 5239 | 5784 | 0 | 0 | 546 | |
SQB002997 | VP4/2 | 631 | 1067 | 0 | 0 | 437 | |
SQB002998 | genome | 1 | 7216 | 0 | 0 | 7216 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPB000502 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
SPB000503 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
SPB000504 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
SPB000505 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
SPB000506 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
SPB000507 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
SPB000508 | 2A (P2-A) | 856 | 1001 | 0 | 0 | 146 | |
SPB000509 | 1D (VP1) | 568 | 855 | 0 | 0 | 288 | |
SPB000510 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
SPB000511 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
SPB000512 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPB000513 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
SPB000514 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
17623054 | New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features. | 2007 | BMC Genomics | View More |