| RVdb StrainID | BNC01639 | GenBank Accession | DQ473488.1 |
| Species | RVB | Sequence Length | 7214 nt |
| Serotype | 48 Checked by RVdb | Serotype (GenBank) | 48 |
| Definition | Rhinovirus B48, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147679 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB001444 | 1A (VP4) | 623 | 829 | 0 | 0 | 207 | |
| SQB001445 | 1B (VP2) | 830 | 1615 | 0 | 0 | 786 | |
| SQB001446 | 1C (VP3) | 1616 | 2323 | 0 | 0 | 708 | |
| SQB001447 | 1D (VP1) | 2324 | 3211 | 0 | 0 | 888 | |
| SQB001448 | 2A (P2-A) | 3212 | 3643 | 0 | 0 | 432 | |
| SQB001449 | 2B (P2-B) | 3644 | 3934 | 0 | 0 | 291 | |
| SQB001450 | 2C (P2-C) | 3935 | 4924 | 0 | 0 | 990 | |
| SQB001451 | 3'UTR | 7178 | 7214 | 0 | 0 | 37 | |
| SQB001452 | 3A (P3-A) | 4925 | 5179 | 0 | 0 | 255 | |
| SQB001453 | 3B (VPg) | 5180 | 5248 | 0 | 0 | 69 | |
| SQB001454 | 3D | 5795 | 7174 | 0 | 0 | 1380 | |
| SQB001455 | 5'UTR | 1 | 622 | 0 | 0 | 622 | |
| SQB001456 | CDS | 623 | 7177 | 0 | 0 | 6555 | |
| SQB001457 | protease 3C | 5249 | 5794 | 0 | 0 | 546 | |
| SQB001458 | VP4/2 | 623 | 1059 | 0 | 0 | 437 | |
| SQB001459 | genome | 1 | 7214 | 0 | 0 | 7214 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB000418 | protease 3C | 1543 | 1724 | 0 | 0 | 182 | |
| SPB000419 | 3D | 1725 | 2184 | 0 | 0 | 460 | |
| SPB000420 | 3B (VPg) | 1520 | 1542 | 0 | 0 | 23 | |
| SPB000421 | 3A (P3-A) | 1435 | 1519 | 0 | 0 | 85 | |
| SPB000422 | 2C (P2-C) | 1105 | 1434 | 0 | 0 | 330 | |
| SPB000423 | 2B (P2-B) | 1008 | 1104 | 0 | 0 | 97 | |
| SPB000424 | 2A (P2-A) | 864 | 1007 | 0 | 0 | 144 | |
| SPB000425 | 1D (VP1) | 568 | 863 | 0 | 0 | 296 | |
| SPB000426 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB000427 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB000428 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB000429 | CDS | 1 | 2184 | 0 | 0 | 2184 | |
| SPB000430 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |