| RVdb StrainID | BNC00539 | GenBank Accession | MH828514.1 |
| Species | RVB | Sequence Length | 6531 nt |
| Serotype | 86 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus B strain vzhrvb3 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | vzhrvb3 | Sampling Date | 2013-04-05 |
| Sampling Country | Viet Nam | Sampling location | -N/A- |
| Isolation Source | NT swab | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | CLC Assembly v. 5.0.4 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB000685 | 1A (VP4) | 1 | 207 | 0 | 0 | 207 | |
| SQB000686 | 1B (VP2) | 208 | 993 | 0 | 0 | 786 | |
| SQB000687 | 1C (VP3) | 994 | 1701 | 0 | 0 | 708 | |
| SQB000688 | 1D (VP1) | 1702 | 2565 | 0 | 0 | 864 | |
| SQB000689 | 2A (P2-A) | 2566 | 3003 | 0 | 0 | 438 | |
| SQB000690 | 2B (P2-B) | 3004 | 3294 | 0 | 0 | 291 | |
| SQB000691 | 2C (P2-C) | 3295 | 4284 | 0 | 0 | 990 | |
| SQB000692 | 3A (P3-A) | 4285 | 4539 | 0 | 0 | 255 | |
| SQB000693 | 3B (VPg) | 4540 | 4608 | 0 | 0 | 69 | |
| SQB000694 | 3D | 5155 | 6531 | 0 | 1 | 1377 | |
| SQB000695 | CDS | 1 | 6531 | 0 | 1 | 6531 | |
| SQB000696 | protease 3C | 4609 | 5154 | 0 | 0 | 546 | |
| SQB000697 | VP4/2 | 1 | 437 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB006224 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB006225 | 3D | 1719 | 2177 | 0 | 1 | 459 | |
| SPB006226 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB006227 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB006228 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB006229 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB006230 | 2A (P2-A) | 856 | 1001 | 0 | 0 | 146 | |
| SPB006231 | 1D (VP1) | 568 | 855 | 0 | 0 | 288 | |
| SPB006232 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB006233 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB006234 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB006235 | CDS | 1 | 2177 | 0 | 0 | 2177 | |
| SPB006236 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 32499763 | Epidemiology and Phylogenetic Analysis of Viral Respiratory Infections in Vietnam. | 2020 | Front Microbiol | View More |