| RVdb StrainID | BNC00039 | GenBank Accession | OM001380.1 |
| Species | RVB | Sequence Length | 7162 nt |
| Serotype | 3 Checked by RVdb | Serotype (GenBank) | 3 |
| Definition | Rhinovirus B3 strain RvB3/USA/2021/HH6GFW, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | RvB3/USA/2021/HH6GFW | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 44130 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB000108 | 1A (VP4) | 589 | 795 | 0 | 0 | 207 | |
| SQB000109 | 1B (VP2) | 796 | 1581 | 0 | 0 | 786 | |
| SQB000110 | 1C (VP3) | 1582 | 2290 | 0 | 0 | 709 | |
| SQB000111 | 1D (VP1) | 2291 | 3156 | 0 | 0 | 866 | |
| SQB000112 | 2A (P2-A) | 3157 | 3591 | 0 | 0 | 435 | |
| SQB000113 | 2B (P2-B) | 3592 | 3882 | 0 | 0 | 291 | |
| SQB000114 | 2C (P2-C) | 3883 | 4872 | 0 | 0 | 990 | |
| SQB000115 | 3'UTR | 7126 | 7162 | 0 | 1 | 37 | |
| SQB000116 | 3A (P3-A) | 4873 | 5127 | 0 | 0 | 255 | |
| SQB000117 | 3B (VPg) | 5128 | 5196 | 0 | 0 | 69 | |
| SQB000118 | 3D | 5743 | 7122 | 0 | 0 | 1380 | |
| SQB000119 | 5'UTR | 1 | 588 | 1 | 0 | 588 | |
| SQB000120 | CDS | 589 | 7125 | 0 | 0 | 6537 | |
| SQB000121 | protease 3C | 5197 | 5742 | 0 | 0 | 546 | |
| SQB000122 | VP4/2 | 589 | 1025 | 0 | 0 | 437 | |
| SQB000123 | genome | 1 | 7162 | 1 | 1 | 7162 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB005684 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB005685 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB005686 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB005687 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB005688 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB005689 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB005690 | 2A (P2-A) | 856 | 1001 | 0 | 0 | 146 | |
| SPB005691 | 1D (VP1) | 568 | 855 | 0 | 0 | 288 | |
| SPB005692 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB005693 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB005694 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB005695 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB005696 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |