| RVdb StrainID | BNC00024 | GenBank Accession | ON311183.1 |
| Species | RVB | Sequence Length | 7213 nt |
| Serotype | 106 Corrected by RVdb | Serotype (GenBank) | 48 |
| Definition | Rhinovirus B48 strain B48_2 polyprotein genes, partial cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | B48_2 | Sampling Date | 2020-11-11 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 147679 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB000060 | 1A (VP4) | 623 | 829 | 0 | 0 | 207 | |
| SQB000061 | 1B (VP2) | 830 | 1615 | 0 | 0 | 786 | |
| SQB000062 | 1C (VP3) | 1616 | 2323 | 0 | 0 | 708 | |
| SQB000063 | 1D (VP1) | 2324 | 3205 | 0 | 0 | 882 | |
| SQB000064 | 2A (P2-A) | 3206 | 3643 | 0 | 0 | 438 | |
| SQB000065 | 2B (P2-B) | 3644 | 3934 | 0 | 0 | 291 | |
| SQB000066 | 2C (P2-C) | 3935 | 4924 | 0 | 0 | 990 | |
| SQB000067 | 3'UTR | 7178 | 7213 | 0 | 1 | 36 | |
| SQB000068 | 3A (P3-A) | 4925 | 5179 | 0 | 0 | 255 | |
| SQB000069 | 3B (VPg) | 5180 | 5248 | 0 | 0 | 69 | |
| SQB000070 | 3D | 5795 | 7174 | 0 | 0 | 1380 | |
| SQB000071 | 5'UTR | 1 | 622 | 0 | 0 | 622 | |
| SQB000072 | CDS | 623 | 7177 | 0 | 0 | 6555 | |
| SQB000073 | protease 3C | 5249 | 5794 | 0 | 0 | 546 | |
| SQB000074 | VP4/2 | 623 | 1059 | 0 | 0 | 437 | |
| SQB000075 | genome | 1 | 7213 | 0 | 1 | 7213 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB006269 | protease 3C | 678 | 859 | 0 | 0 | 182 | |
| SPB006270 | 3D | 860 | 1319 | 0 | 0 | 460 | |
| SPB006271 | 3B (VPg) | 655 | 677 | 0 | 0 | 23 | |
| SPB006272 | 3A (P3-A) | 570 | 654 | 0 | 0 | 85 | |
| SPB006273 | 2C (P2-C) | 240 | 569 | 0 | 0 | 330 | |
| SPB006274 | 2B (P2-B) | 143 | 239 | 0 | 0 | 97 | |
| SPB006275 | 2A (P2-A) | 1 | 142 | 1 | 0 | 142 | |
| SPB006276 | CDS | 1 | 1319 | 0 | 1 | 1319 | |
| SPB006974 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPB007216 | 1D (VP1) | 568 | 831 | 0 | 1 | 264 | |
| SPB007217 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB007218 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB007219 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |