| RVdb StrainID | BNC00019 | GenBank Accession | ON311188.1 |
| Species | RVB | Sequence Length | 6978 nt |
| Serotype | 27 Checked by RVdb | Serotype (GenBank) | 27 |
| Definition | Rhinovirus B27 strain B27_15 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | B27_15 | Sampling Date | 2020-10-14 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185900 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB000045 | 1A (VP4) | 423 | 629 | 0 | 0 | 207 | |
| SQB000046 | 1B (VP2) | 630 | 1415 | 0 | 0 | 786 | |
| SQB000047 | 1C (VP3) | 1416 | 2123 | 0 | 0 | 708 | |
| SQB000048 | 1D (VP1) | 2124 | 2984 | 0 | 0 | 861 | |
| SQB000049 | 2A (P2-A) | 2985 | 3425 | 0 | 0 | 441 | |
| SQB000050 | 2B (P2-B) | 3426 | 3716 | 0 | 0 | 291 | |
| SQB000051 | 2C (P2-C) | 3717 | 4706 | 0 | 0 | 990 | |
| SQB000052 | 3A (P3-A) | 4707 | 4961 | 0 | 0 | 255 | |
| SQB000053 | 3B (VPg) | 4962 | 5030 | 0 | 0 | 69 | |
| SQB000054 | 3D | 5577 | 6956 | 0 | 0 | 1380 | |
| SQB000055 | 5'UTR | 1 | 422 | 1 | 0 | 422 | |
| SQB000056 | CDS | 423 | 6959 | 0 | 0 | 6537 | |
| SQB000057 | protease 3C | 5031 | 5576 | 0 | 0 | 546 | |
| SQB000058 | VP4/2 | 423 | 859 | 0 | 0 | 437 | |
| SQB000059 | genome | 1 | 6978 | 1 | 1 | 6978 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB006329 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB006330 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB006331 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB006332 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB006333 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB006334 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB006335 | 2A (P2-A) | 857 | 1001 | 0 | 0 | 145 | |
| SPB006336 | 1D (VP1) | 568 | 856 | 0 | 0 | 289 | |
| SPB006337 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB006338 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB006339 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB006340 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB006341 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |