| RVdb StrainID | BNC00004 | GenBank Accession | ON311275.1 |
| Species | RVB | Sequence Length | 7188 nt |
| Serotype | 102 Corrected by RVdb | Serotype (GenBank) | 35 |
| Definition | Rhinovirus B35 strain B102_1 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | B102_1 | Sampling Date | 2020-03-12 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 167329 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB000001 | 1A (VP4) | 623 | 829 | 0 | 0 | 207 | |
| SQB000002 | 1B (VP2) | 830 | 1627 | 0 | 0 | 798 | |
| SQB000003 | 1C (VP3) | 1628 | 2335 | 0 | 0 | 708 | |
| SQB000004 | 1D (VP1) | 2336 | 3208 | 0 | 0 | 873 | |
| SQB000005 | 2A (P2-A) | 3209 | 3646 | 0 | 0 | 438 | |
| SQB000006 | 2B (P2-B) | 3647 | 3937 | 0 | 0 | 291 | |
| SQB000007 | 2C (P2-C) | 3938 | 5082 | 0 | 0 | 1145 | |
| SQB000008 | 3A (P3-A) | 5083 | 5338 | 0 | 0 | 256 | |
| SQB000009 | 3B (VPg) | 5339 | 5407 | 0 | 0 | 69 | |
| SQB000010 | 3D | 5954 | 7188 | 0 | 1 | 1235 | |
| SQB000011 | 5'UTR | 1 | 622 | 1 | 0 | 622 | |
| SQB000012 | CDS | 623 | 7188 | 0 | 1 | 6566 | |
| SQB000013 | protease 3C | 5408 | 5953 | 0 | 0 | 546 | |
| SQB000014 | VP4/2 | 623 | 1059 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB006524 | protease 3C | 1596 | 1777 | 0 | 0 | 182 | |
| SPB006525 | 3D | 1778 | 2188 | 0 | 1 | 411 | |
| SPB006526 | 3B (VPg) | 1573 | 1595 | 0 | 0 | 23 | |
| SPB006527 | 3A (P3-A) | 1488 | 1572 | 0 | 0 | 85 | |
| SPB006528 | 2C (P2-C) | 1106 | 1487 | 0 | 0 | 382 | |
| SPB006529 | 2B (P2-B) | 1009 | 1105 | 0 | 0 | 97 | |
| SPB006530 | 2A (P2-A) | 863 | 1008 | 0 | 0 | 146 | |
| SPB006531 | 1D (VP1) | 572 | 862 | 0 | 0 | 291 | |
| SPB006532 | 1C (VP3) | 336 | 571 | 0 | 0 | 236 | |
| SPB006533 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
| SPB006534 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB006535 | CDS | 1 | 2188 | 0 | 0 | 2188 | |
| SPB006536 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |