RVdb StrainID | ANZ08341 | GenBank Accession | DQ473494.1 |
Species | RVA | Sequence Length | 7120 nt |
Serotype | 74 Checked by RVdb | Serotype (GenBank) | 74 |
Definition | Rhinovirus A74, complete genome | GenBank Submission Date | 2022-01-24 |
Strain Name | -N/A- | Sampling Date | -N/A- |
Sampling Country | USA | Sampling location | -N/A- |
Isolation Source | -N/A- | NCBI Taxon ID | 185929 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA038591 | 1A (VP4) | 611 | 817 | 0 | 0 | 207 | |
SQA038592 | 1B (VP2) | 818 | 1603 | 0 | 0 | 786 | |
SQA038593 | 1C (VP3) | 1604 | 2317 | 0 | 0 | 714 | |
SQA038594 | 1D (VP1) | 2318 | 3178 | 0 | 0 | 861 | |
SQA038595 | 2A (P2-A) | 3179 | 3604 | 0 | 0 | 426 | |
SQA038596 | 2B (P2-B) | 3605 | 3889 | 0 | 0 | 285 | |
SQA038597 | 2C (P2-C) | 3890 | 4855 | 0 | 0 | 966 | |
SQA038598 | 3'UTR | 7082 | 7120 | 0 | 0 | 39 | |
SQA038599 | 3A (P3-A) | 4856 | 5086 | 0 | 0 | 231 | |
SQA038600 | 3B (VPg) | 5087 | 5149 | 0 | 0 | 63 | |
SQA038601 | protease 3C | 5150 | 5698 | 0 | 0 | 549 | |
SQA038602 | 3D | 5699 | 7078 | 0 | 0 | 1380 | |
SQA038603 | 5'UTR | 1 | 610 | 0 | 0 | 610 | |
SQA038604 | CDS | 611 | 7081 | 0 | 0 | 6471 | |
SQA038605 | VP4/2 | 611 | 1045 | 0 | 0 | 435 | |
SQA038606 | genome | 1 | 7120 | 0 | 0 | 7120 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA000568 | protease 3C | 1514 | 1696 | 0 | 0 | 183 | |
SPA000569 | 3D | 1697 | 2156 | 0 | 0 | 460 | |
SPA000570 | 3B (VPg) | 1493 | 1513 | 0 | 0 | 21 | |
SPA000571 | 3A (P3-A) | 1416 | 1492 | 0 | 0 | 77 | |
SPA000572 | 2C (P2-C) | 1094 | 1415 | 0 | 0 | 322 | |
SPA000573 | 2B (P2-B) | 999 | 1093 | 0 | 0 | 95 | |
SPA000574 | 2A (P2-A) | 857 | 998 | 0 | 0 | 142 | |
SPA000575 | 1D (VP1) | 570 | 856 | 0 | 0 | 287 | |
SPA000576 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
SPA000577 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
SPA000578 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA000579 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
SPA000580 | CDS | 1 | 2156 | 0 | 0 | 2156 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |