| RVdb StrainID | ANZ08316 | GenBank Accession | EF173418.1 |
| Species | RVA | Sequence Length | 7145 nt |
| Serotype | 78 Checked by RVdb | Serotype (GenBank) | 78 |
| Definition | Human rhinovirus 78, complete genome | GenBank Submission Date | 2007-07-15 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | -N/A- | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147685 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA038524 | 1A (VP4) | 623 | 829 | 0 | 0 | 207 | |
| SQA038525 | 1B (VP2) | 830 | 1621 | 0 | 0 | 792 | |
| SQA038526 | 1C (VP3) | 1622 | 2335 | 0 | 0 | 714 | |
| SQA038527 | 1D (VP1) | 2336 | 3196 | 0 | 0 | 861 | |
| SQA038528 | 2A (P2-A) | 3197 | 3625 | 0 | 0 | 429 | |
| SQA038529 | 2B (P2-B) | 3626 | 3910 | 0 | 0 | 285 | |
| SQA038530 | 2C (P2-C) | 3911 | 4876 | 0 | 0 | 966 | |
| SQA038531 | 3'UTR | 7103 | 7145 | 0 | 0 | 43 | |
| SQA038532 | 3A (P3-A) | 4877 | 5107 | 0 | 0 | 231 | |
| SQA038533 | 3B (VPg) | 5108 | 5170 | 0 | 0 | 63 | |
| SQA038534 | protease 3C | 5171 | 5719 | 0 | 0 | 549 | |
| SQA038535 | 3D | 5720 | 7099 | 0 | 0 | 1380 | |
| SQA038536 | 5'UTR | 1 | 622 | 0 | 0 | 622 | |
| SQA038537 | CDS | 623 | 7102 | 0 | 0 | 6480 | |
| SQA038538 | VP4/2 | 623 | 1057 | 0 | 0 | 435 | |
| SQA038539 | genome | 1 | 7145 | 0 | 0 | 7145 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000892 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA000893 | 3D | 1700 | 2159 | 0 | 0 | 460 | |
| SPA000894 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA000895 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA000896 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA000897 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA000898 | 2A (P2-A) | 859 | 1001 | 0 | 0 | 143 | |
| SPA000899 | 1D (VP1) | 572 | 858 | 0 | 0 | 287 | |
| SPA000900 | 1C (VP3) | 334 | 571 | 0 | 0 | 238 | |
| SPA000901 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA000902 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000903 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000904 | CDS | 1 | 2159 | 0 | 0 | 2159 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17623054 | New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features. | 2007 | BMC Genomics | View More |