RVdb StrainID | ANZ05091 | GenBank Accession | KR059992.1 |
Species | RVA | Sequence Length | 561 nt |
Serotype | -N/A- | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus A isolate KENHRV004 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV004 | Sampling Date | 2008-03-13 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA036483 | 1A (VP4) | 151 | 357 | 0 | 0 | 207 | |
SQA036484 | 5'UTR | 1 | 150 | 1 | 0 | 150 | |
SQA036485 | CDS | 151 | 561 | 0 | 1 | 411 | |
SQA036486 | VP4/2 | 151 | 561 | 0 | 1 | 411 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008283 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008284 | VP4/2 | 1 | 137 | 0 | 1 | 137 | |
SPA008285 | CDS | 1 | 137 | 0 | 0 | 137 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |