RVdb StrainID | ANZ05086 | GenBank Accession | KR059997.1 |
Species | RVA | Sequence Length | 435 nt |
Serotype | 29 | Serotype (GenBank) | 29 |
Definition | Rhinovirus A isolate KENHRV011 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV011 | Sampling Date | 2008-11-18 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA036479 | 1A (VP4) | 19 | 225 | 0 | 0 | 207 | |
SQA036480 | 5'UTR | 1 | 18 | 1 | 0 | 18 | |
SQA036481 | CDS | 19 | 435 | 0 | 1 | 417 | |
SQA036482 | VP4/2 | 19 | 435 | 0 | 1 | 417 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008298 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008299 | VP4/2 | 1 | 139 | 0 | 1 | 139 | |
SPA008300 | CDS | 1 | 139 | 0 | 0 | 139 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |