RVdb StrainID | ANZ05081 | GenBank Accession | KR060002.1 |
Species | RVA | Sequence Length | 423 nt |
Serotype | 20 | Serotype (GenBank) | 20 |
Definition | Rhinovirus A isolate KENHRV025 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV025 | Sampling Date | 2008-04-09 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA036475 | 1A (VP4) | 19 | 225 | 0 | 0 | 207 | |
SQA036476 | 5'UTR | 1 | 18 | 1 | 0 | 18 | |
SQA036477 | CDS | 19 | 423 | 0 | 1 | 405 | |
SQA036478 | VP4/2 | 19 | 423 | 0 | 1 | 405 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008313 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008314 | VP4/2 | 1 | 135 | 0 | 1 | 135 | |
SPA008315 | CDS | 1 | 135 | 0 | 0 | 135 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |