| RVdb StrainID | ANZ00196 | GenBank Accession | OL961547.1 |
| Species | RVA | Sequence Length | 7125 nt |
| Serotype | 29 Checked by RVdb | Serotype (GenBank) | 29 |
| Definition | Rhinovirus A29 strain RvA29/USA/2021/VRDKSF, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA29/USA/2021/VRDKSF | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 44129 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031853 | 1A (VP4) | 615 | 821 | 0 | 0 | 207 | |
| SQA031854 | 1B (VP2) | 822 | 1619 | 0 | 0 | 798 | |
| SQA031855 | 1C (VP3) | 1620 | 2333 | 0 | 0 | 714 | |
| SQA031856 | 1D (VP1) | 2334 | 3182 | 0 | 0 | 849 | |
| SQA031857 | 2A (P2-A) | 3183 | 3602 | 0 | 0 | 420 | |
| SQA031858 | 2B (P2-B) | 3603 | 3887 | 0 | 0 | 285 | |
| SQA031859 | 2C (P2-C) | 3888 | 4853 | 0 | 0 | 966 | |
| SQA031860 | 3'UTR | 7080 | 7125 | 0 | 0 | 46 | |
| SQA031861 | 3A (P3-A) | 4854 | 5084 | 0 | 0 | 231 | |
| SQA031862 | 3B (VPg) | 5085 | 5147 | 0 | 0 | 63 | |
| SQA031863 | protease 3C | 5148 | 5696 | 0 | 0 | 549 | |
| SQA031864 | 3D | 5697 | 7076 | 0 | 0 | 1380 | |
| SQA031865 | 5'UTR | 1 | 614 | 0 | 0 | 614 | |
| SQA031866 | CDS | 615 | 7079 | 0 | 0 | 6465 | |
| SQA031867 | VP4/2 | 615 | 1049 | 0 | 0 | 435 | |
| SQA031868 | genome | 1 | 7125 | 0 | 0 | 7125 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA027744 | protease 3C | 1512 | 1694 | 0 | 0 | 183 | |
| SPA027745 | 3D | 1695 | 2150 | 0 | 0 | 456 | |
| SPA027746 | 3B (VPg) | 1491 | 1511 | 0 | 0 | 21 | |
| SPA027747 | 3A (P3-A) | 1414 | 1490 | 0 | 0 | 77 | |
| SPA027748 | 2C (P2-C) | 1092 | 1413 | 0 | 0 | 322 | |
| SPA027749 | 2B (P2-B) | 997 | 1091 | 0 | 0 | 95 | |
| SPA027750 | 2A (P2-A) | 855 | 996 | 0 | 0 | 142 | |
| SPA027751 | 1D (VP1) | 574 | 854 | 0 | 0 | 281 | |
| SPA027752 | 1C (VP3) | 334 | 573 | 0 | 0 | 240 | |
| SPA027753 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA027754 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA027755 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA027756 | CDS | 1 | 2154 | 0 | 0 | 2154 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |