| RVdb StrainID | ANZ00166 | GenBank Accession | OM001375.1 |
| Species | RVA | Sequence Length | 7073 nt |
| Serotype | 2 Checked by RVdb | Serotype (GenBank) | 2 |
| Definition | Rhinovirus A2 strain RvA2/USA/2021/DEJMCF, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA2/USA/2021/DEJMCF | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 12130 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031757 | 1A (VP4) | 591 | 797 | 0 | 0 | 207 | |
| SQA031758 | 1B (VP2) | 798 | 1577 | 0 | 0 | 780 | |
| SQA031759 | 1C (VP3) | 1578 | 2288 | 0 | 0 | 711 | |
| SQA031760 | 1D (VP1) | 2289 | 3137 | 0 | 0 | 849 | |
| SQA031761 | 2A (P2-A) | 3138 | 3563 | 0 | 0 | 426 | |
| SQA031762 | 2B (P2-B) | 3564 | 3848 | 0 | 0 | 285 | |
| SQA031763 | 2C (P2-C) | 3849 | 4821 | 0 | 0 | 973 | |
| SQA031764 | 3'UTR | 7041 | 7073 | 0 | 1 | 33 | |
| SQA031765 | 3A (P3-A) | 4822 | 5045 | 0 | 0 | 224 | |
| SQA031766 | 3B (VPg) | 5046 | 5108 | 0 | 0 | 63 | |
| SQA031767 | protease 3C | 5109 | 5657 | 0 | 0 | 549 | |
| SQA031768 | 3D | 5658 | 7037 | 0 | 0 | 1380 | |
| SQA031769 | 5'UTR | 1 | 590 | 1 | 0 | 590 | |
| SQA031770 | CDS | 591 | 7040 | 0 | 0 | 6450 | |
| SQA031771 | VP4/2 | 591 | 1025 | 0 | 0 | 435 | |
| SQA031772 | genome | 1 | 7073 | 1 | 1 | 7073 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA026587 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPA026588 | 3D | 1690 | 2145 | 0 | 0 | 456 | |
| SPA026589 | 3B (VPg) | 1486 | 1506 | 0 | 0 | 21 | |
| SPA026590 | 3A (P3-A) | 1409 | 1485 | 0 | 0 | 77 | |
| SPA026591 | 2C (P2-C) | 1087 | 1408 | 0 | 0 | 322 | |
| SPA026592 | 2B (P2-B) | 992 | 1086 | 0 | 0 | 95 | |
| SPA026593 | 2A (P2-A) | 850 | 991 | 0 | 0 | 142 | |
| SPA026594 | 1D (VP1) | 567 | 849 | 0 | 0 | 283 | |
| SPA026595 | 1C (VP3) | 330 | 566 | 0 | 0 | 237 | |
| SPA026596 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA026597 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA026598 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA026599 | CDS | 1 | 2149 | 0 | 0 | 2149 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |