| RVdb StrainID | ANZ00141 | GenBank Accession | OM001404.1 |
| Species | RVA | Sequence Length | 7060 nt |
| Serotype | 61 Checked by RVdb | Serotype (GenBank) | 61 |
| Definition | Rhinovirus A61 strain RvA61/USA/2021/8G5Q4U polyprotein gene, partial cds | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA61/USA/2021/8G5Q4U | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185920 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031680 | 1A (VP4) | 594 | 800 | 0 | 0 | 207 | |
| SQA031681 | 1B (VP2) | 801 | 1583 | 0 | 0 | 783 | |
| SQA031682 | 1C (VP3) | 1584 | 2297 | 0 | 0 | 714 | |
| SQA031683 | 1D (VP1) | 2298 | 3173 | 0 | 0 | 876 | |
| SQA031684 | 2A (P2-A) | 3174 | 3599 | 0 | 0 | 426 | |
| SQA031685 | 2B (P2-B) | 3600 | 3884 | 0 | 0 | 285 | |
| SQA031686 | 2C (P2-C) | 3885 | 4857 | 0 | 0 | 973 | |
| SQA031687 | 3A (P3-A) | 4858 | 5081 | 0 | 0 | 224 | |
| SQA031688 | 3B (VPg) | 5082 | 5144 | 0 | 0 | 63 | |
| SQA031689 | protease 3C | 5145 | 5693 | 0 | 0 | 549 | |
| SQA031690 | 3D | 5694 | 7060 | 0 | 1 | 1367 | |
| SQA031691 | 5'UTR | 1 | 593 | 1 | 0 | 593 | |
| SQA031692 | CDS | 594 | 7060 | 0 | 1 | 6467 | |
| SQA031693 | VP4/2 | 594 | 1028 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA026912 | protease 3C | 1518 | 1700 | 0 | 0 | 183 | |
| SPA026913 | 3D | 1701 | 2155 | 0 | 1 | 455 | |
| SPA026914 | 3B (VPg) | 1497 | 1517 | 0 | 0 | 21 | |
| SPA026915 | 3A (P3-A) | 1420 | 1496 | 0 | 0 | 77 | |
| SPA026916 | 2C (P2-C) | 1098 | 1419 | 0 | 0 | 322 | |
| SPA026917 | 2B (P2-B) | 1003 | 1097 | 0 | 0 | 95 | |
| SPA026918 | 2A (P2-A) | 861 | 1002 | 0 | 0 | 142 | |
| SPA026919 | 1D (VP1) | 569 | 860 | 0 | 0 | 292 | |
| SPA026920 | 1C (VP3) | 331 | 568 | 0 | 0 | 238 | |
| SPA026921 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA026922 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA026923 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA026924 | CDS | 1 | 2155 | 0 | 0 | 2155 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |