| RVdb StrainID | ANZ00136 | GenBank Accession | OM001413.1 |
| Species | RVA | Sequence Length | 7020 nt |
| Serotype | 101 Checked by RVdb | Serotype (GenBank) | 101 |
| Definition | Rhinovirus A101 strain RvA101/USA/2021/32263Q, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA101/USA/2021/32263Q | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 1219381 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031664 | 1A (VP4) | 522 | 728 | 0 | 0 | 207 | |
| SQA031665 | 1B (VP2) | 729 | 1494 | 0 | 0 | 766 | |
| SQA031666 | 1C (VP3) | 1495 | 2228 | 0 | 0 | 734 | |
| SQA031667 | 1D (VP1) | 2229 | 3095 | 0 | 0 | 867 | |
| SQA031668 | 2A (P2-A) | 3096 | 3524 | 0 | 0 | 429 | |
| SQA031669 | 2B (P2-B) | 3525 | 3809 | 0 | 0 | 285 | |
| SQA031670 | 2C (P2-C) | 3810 | 4772 | 0 | 0 | 963 | |
| SQA031671 | 3'UTR | 6999 | 7020 | 0 | 1 | 22 | |
| SQA031672 | 3A (P3-A) | 4773 | 5006 | 0 | 0 | 234 | |
| SQA031673 | 3B (VPg) | 5007 | 5069 | 0 | 0 | 63 | |
| SQA031674 | protease 3C | 5070 | 5618 | 0 | 0 | 549 | |
| SQA031675 | 3D | 5619 | 6995 | 0 | 0 | 1377 | |
| SQA031676 | 5'UTR | 1 | 521 | 1 | 0 | 521 | |
| SQA031677 | CDS | 522 | 6998 | 0 | 0 | 6477 | |
| SQA031678 | VP4/2 | 522 | 956 | 0 | 0 | 435 | |
| SQA031679 | genome | 1 | 7020 | 1 | 1 | 7020 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA026977 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA026978 | 3D | 1700 | 2158 | 0 | 0 | 459 | |
| SPA026979 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA026980 | 3A (P3-A) | 1418 | 1495 | 0 | 0 | 78 | |
| SPA026981 | 2C (P2-C) | 1097 | 1417 | 0 | 0 | 321 | |
| SPA026982 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA026983 | 2A (P2-A) | 859 | 1001 | 0 | 0 | 143 | |
| SPA026984 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA026985 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA026986 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA026987 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA026988 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA026989 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |