| RVdb StrainID | ANZ00086 | GenBank Accession | ON311209.1 |
| Species | RVA | Sequence Length | 7033 nt |
| Serotype | 82 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus A strain A82_3 polyprotein gene, partial cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A82_3 | Sampling Date | 2020-11-13 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 147711 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031506 | 1A (VP4) | 576 | 782 | 0 | 0 | 207 | |
| SQA031507 | 1B (VP2) | 783 | 1562 | 0 | 0 | 780 | |
| SQA031508 | 1C (VP3) | 1563 | 2273 | 0 | 0 | 711 | |
| SQA031509 | 1D (VP1) | 2274 | 3140 | 0 | 0 | 867 | |
| SQA031510 | 2A (P2-A) | 3141 | 3566 | 0 | 0 | 426 | |
| SQA031511 | 2B (P2-B) | 3567 | 3851 | 0 | 0 | 285 | |
| SQA031512 | 2C (P2-C) | 3852 | 4817 | 0 | 0 | 966 | |
| SQA031513 | 3A (P3-A) | 4818 | 5048 | 0 | 0 | 231 | |
| SQA031514 | 3B (VPg) | 5049 | 5111 | 0 | 0 | 63 | |
| SQA031515 | protease 3C | 5112 | 5660 | 0 | 0 | 549 | |
| SQA031516 | 3D | 5661 | 7033 | 0 | 1 | 1373 | |
| SQA031517 | 5'UTR | 1 | 575 | 1 | 0 | 575 | |
| SQA031518 | CDS | 576 | 7033 | 0 | 1 | 6458 | |
| SQA031519 | VP4/2 | 576 | 1010 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA029514 | protease 3C | 1513 | 1695 | 0 | 0 | 183 | |
| SPA029515 | 3D | 1696 | 2152 | 0 | 1 | 457 | |
| SPA029516 | 3B (VPg) | 1492 | 1512 | 0 | 0 | 21 | |
| SPA029517 | 3A (P3-A) | 1415 | 1491 | 0 | 0 | 77 | |
| SPA029518 | 2C (P2-C) | 1093 | 1414 | 0 | 0 | 322 | |
| SPA029519 | 2B (P2-B) | 998 | 1092 | 0 | 0 | 95 | |
| SPA029520 | 2A (P2-A) | 856 | 997 | 0 | 0 | 142 | |
| SPA029521 | 1D (VP1) | 567 | 855 | 0 | 0 | 289 | |
| SPA029522 | 1C (VP3) | 330 | 566 | 0 | 0 | 237 | |
| SPA029523 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA029524 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA029525 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA029526 | CDS | 1 | 2152 | 0 | 0 | 2152 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |